Analysis of interatomic Contacts of Structural Units in PDB entry:
4WWH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WWH entry

There are 2 chains in PDB entry 4WWH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 37GLN 365
B
 ALA 37TYR 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 4WWH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
51 67Right-handed alpha
Helix 2
AA2
A
79 93Right-handed alpha
Helix 3
AA3
A
108 118Right-handed alpha
Helix 4
AA4
A
142 159Right-handed alpha
Helix 5
AA5
A
160 163Right-handed 310
Helix 6
AA6
A
179 198Right-handed alpha
Helix 7
AA7
A
209 214Right-handed alpha
Helix 8
AA8
A
215 218Right-handed 310
Helix 9
AA9
A
219 234Right-handed alpha
Helix 10
AB1
A
247 261Right-handed alpha
Helix 11
AB2
A
279 288Right-handed alpha
Helix 12
AB3
A
298 315Right-handed alpha
Helix 13
AB4
A
348 354Right-handed alpha
Helix 14
AB5
A
361 365Right-handed 310
Helix 15
AB6
B
51 67Right-handed alpha
Helix 16
AB7
B
79 93Right-handed alpha
Helix 17
AB8
B
108 118Right-handed alpha
Helix 18
AB9
B
142 159Right-handed alpha
Helix 19
AC1
B
160 163Right-handed 310
Helix 20
AC2
B
179 198Right-handed alpha
Helix 21
AC3
B
209 214Right-handed alpha
Helix 22
AC4
B
215 218Right-handed 310
Helix 23
AC5
B
219 235Right-handed alpha
Helix 24
AC6
B
247 261Right-handed alpha
Helix 25
AC7
B
279 288Right-handed alpha
Helix 26
AC8
B
298 315Right-handed alpha
Helix 27
AC9
B
348 354Right-handed alpha
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There are 6 sheets in PDB entry 4WWH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 75first strand
Strand 2
A
40 45parallel
Strand 3
A
97 100parallel
Strand 4
A
122 125parallel
Strand 5
A
137 141parallel
Strand 6
A
336 339parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 202first strand
Strand 2
A
167 171parallel
Strand 3
A
242 244parallel
Strand 4
A
272 273parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
294 296first strand
Strand 2
A
342 344anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 75first strand
Strand 2
B
40 45parallel
Strand 3
B
97 100parallel
Strand 4
B
122 125parallel
Strand 5
B
137 141parallel
Strand 6
B
336 339parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
201 202first strand
Strand 2
B
167 171parallel
Strand 3
B
242 244parallel
Strand 4
B
272 273parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
293 296first strand
Strand 2
B
342 345anti-parallel
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