Analysis of interatomic Contacts of Structural Units in PDB entry:
4WWL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WWL entry

There is 1 chain in PDB entry 4WWL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 26GLN 550
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 4WWL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
55 74Right-handed alpha
Helix 2
AA2
A
89 94Right-handed alpha
Helix 3
AA3
A
97 108Right-handed alpha
Helix 4
AA4
A
115 120Right-handed 310
Helix 5
AA5
A
122 133Right-handed alpha
Helix 6
AA6
A
174 179Right-handed alpha
Helix 7
AA7
A
180 185Right-handed 310
Helix 8
AA8
A
191 206Right-handed alpha
Helix 9
AA9
A
221 225Right-handed 310
Helix 10
AB1
A
232 240Right-handed alpha
Helix 11
AB2
A
342 361Right-handed alpha
Helix 12
AB3
A
374 379Right-handed alpha
Helix 13
AB4
A
383 398Right-handed alpha
Helix 14
AB5
A
407 409Right-handed 310
Helix 15
AB6
A
420 427Right-handed alpha
Helix 16
AB7
A
440 451Right-handed alpha
Helix 17
AB8
A
497 501Right-handed alpha
Helix 18
AB9
A
502 506Right-handed 310
Helix 19
AC1
A
522 534Right-handed alpha
Helix 20
AC2
A
537 542Right-handed 310
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There are 8 sheets in PDB entry 4WWL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 138first strand
Strand 2
A
111 113parallel
Strand 3
A
76 81parallel
Strand 4
A
32 39parallel
Strand 5
A
294 303anti-parallel
Strand 6
A
306 316anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 150first strand
Strand 2
A
142 144anti-parallel
Strand 3
A
187 189anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 160first strand
Strand 2
A
163 171anti-parallel
Strand 3
A
211 217parallel
Strand 4
A
247 249parallel
Strand 5
A
283 286parallel
Strand 6
A
278 280anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 261first strand
Strand 2
A
264 265anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
320 324first strand
Strand 2
A
330 334anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
363 367first strand
Strand 2
A
416 419anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
461 464first strand
Strand 2
A
401 405anti-parallel
Strand 3
A
490 496parallel
Strand 4
A
432 439anti-parallel
Strand 5
A
515 521anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
483 484first strand
Strand 2
A
474 480anti-parallel
Strand 3
A
466 471anti-parallel
Strand 4
A
547 549parallel
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