Analysis of interatomic Contacts of Structural Units in PDB entry:
4WWU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4WWU entry

There are 12 chains in PDB entry 4WWU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 23	ASP 93
B	SER 101	THR 477
C	MET 8	ILE 184
D	ILE 23	LEU 91
E	THR 100	THR 477
F	MET 8	ILE 184
G	ILE 23	LEU 91
H	THR 100	THR 477
I	MET 8	ILE 184
J	ILE 23	ASP 93
K	SER 101	THR 477
L	MET 8	ILE 184

There are 89 helices in PDB entry 4WWU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	34	46	Right-handed alpha
Helix 2	AA2	A	66	76	Right-handed alpha
Helix 3	AA3	B	102	114	Right-handed alpha
Helix 4	AA4	B	126	129	Right-handed 310
Helix 5	AA5	B	130	137	Right-handed alpha
Helix 6	AA6	B	147	160	Right-handed alpha
Helix 7	AA7	B	176	181	Right-handed 310
Helix 8	AA8	B	182	187	Right-handed alpha
Helix 9	AA9	B	204	210	Right-handed 310
Helix 10	AB1	B	224	229	Right-handed 310
Helix 11	AB2	B	231	240	Right-handed alpha
Helix 12	AB3	B	253	261	Right-handed alpha
Helix 13	AB4	B	274	295	Right-handed alpha
Helix 14	AB5	B	296	301	Right-handed 310
Helix 15	AB6	B	346	354	Right-handed alpha
Helix 16	AB7	B	357	368	Right-handed alpha
Helix 17	AB8	B	378	382	Right-handed 310
Helix 18	AB9	B	390	393	Right-handed 310
Helix 19	AC1	C	12	32	Right-handed alpha
Helix 20	AC2	C	37	42	Right-handed alpha
Helix 21	AC3	C	43	45	Right-handed 310
Helix 22	AC4	C	61	73	Right-handed alpha
Helix 23	AC5	C	156	160	Right-handed 310
Helix 24	AC6	D	34	46	Right-handed alpha
Helix 25	AC7	D	66	76	Right-handed alpha
Helix 26	AC8	E	101	114	Right-handed alpha
Helix 27	AC9	E	126	129	Right-handed 310
Helix 28	AD1	E	130	137	Right-handed alpha
Helix 29	AD2	E	147	159	Right-handed alpha
Helix 30	AD3	E	176	181	Right-handed 310
Helix 31	AD4	E	182	187	Right-handed alpha
Helix 32	AD5	E	204	210	Right-handed 310
Helix 33	AD6	E	224	229	Right-handed 310
Helix 34	AD7	E	231	240	Right-handed alpha
Helix 35	AD8	E	253	261	Right-handed alpha
Helix 36	AD9	E	274	295	Right-handed alpha
Helix 37	AE1	E	296	303	Right-handed 310
Helix 38	AE2	E	331	336	Right-handed alpha
Helix 39	AE3	E	346	354	Right-handed alpha
Helix 40	AE4	E	357	368	Right-handed alpha
Helix 41	AE5	E	378	382	Right-handed 310
Helix 42	AE6	F	12	32	Right-handed alpha
Helix 43	AE7	F	37	45	Right-handed alpha
Helix 44	AE8	F	61	72	Right-handed alpha
Helix 45	AE9	F	156	160	Right-handed 310
Helix 46	AF1	G	34	46	Right-handed alpha
Helix 47	AF2	G	66	76	Right-handed alpha
Helix 48	AF3	H	101	114	Right-handed alpha
Helix 49	AF4	H	130	137	Right-handed alpha
Helix 50	AF5	H	147	159	Right-handed alpha
Helix 51	AF6	H	176	181	Right-handed 310
Helix 52	AF7	H	182	187	Right-handed alpha
Helix 53	AF8	H	204	210	Right-handed 310
Helix 54	AF9	H	224	229	Right-handed 310
Helix 55	AG1	H	231	240	Right-handed alpha
Helix 56	AG2	H	253	261	Right-handed alpha
Helix 57	AG3	H	274	295	Right-handed alpha
Helix 58	AG4	H	296	301	Right-handed 310
Helix 59	AG5	H	331	336	Right-handed alpha
Helix 60	AG6	H	346	354	Right-handed alpha
Helix 61	AG7	H	357	368	Right-handed alpha
Helix 62	AG8	H	378	382	Right-handed 310
Helix 63	AG9	I	12	32	Right-handed alpha
Helix 64	AH1	I	34	43	Right-handed alpha
Helix 65	AH2	I	61	73	Right-handed alpha
Helix 66	AH3	I	156	160	Right-handed 310
Helix 67	AH4	J	34	46	Right-handed alpha
Helix 68	AH5	J	66	76	Right-handed alpha
Helix 69	AH6	K	102	114	Right-handed alpha
Helix 70	AH7	K	130	137	Right-handed alpha
Helix 71	AH8	K	147	159	Right-handed alpha
Helix 72	AH9	K	177	181	Right-handed 310
Helix 73	AI1	K	182	187	Right-handed alpha
Helix 74	AI2	K	204	210	Right-handed 310
Helix 75	AI3	K	224	229	Right-handed 310
Helix 76	AI4	K	231	240	Right-handed alpha
Helix 77	AI5	K	253	261	Right-handed alpha
Helix 78	AI6	K	274	295	Right-handed alpha
Helix 79	AI7	K	296	301	Right-handed 310
Helix 80	AI8	K	334	338	Right-handed 310
Helix 81	AI9	K	346	354	Right-handed alpha
Helix 82	AJ1	K	357	368	Right-handed alpha
Helix 83	AJ2	K	378	382	Right-handed 310
Helix 84	AJ3	K	390	393	Right-handed 310
Helix 85	AJ4	K	433	438	Right-handed alpha
Helix 86	AJ5	L	12	32	Right-handed alpha
Helix 87	AJ6	L	34	45	Right-handed alpha
Helix 88	AJ7	L	61	72	Right-handed alpha
Helix 89	AJ8	L	156	160	Right-handed 310

There are 20 sheets in PDB entry 4WWU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	54	first strand
Strand 2	A	60	63	anti-parallel
Strand 3	A	24	28	anti-parallel
Strand 4	A	87	90	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	115	116	first strand
Strand 2	B	121	123	anti-parallel
Strand 3	B	166	168	parallel
Strand 4	B	192	194	parallel
Strand 5	B	218	220	parallel
Strand 6	B	245	246	parallel
Strand 7	B	249	250	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	270	272	first strand
Strand 2	B	383	389	parallel
Strand 3	B	394	407	anti-parallel
Strand 4	B	443	453	anti-parallel
Strand 5	B	458	469	anti-parallel
Strand 6	B	303	314	parallel
Strand 7	B	355	356	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	270	272	first strand
Strand 2	B	383	389	parallel
Strand 3	B	394	407	anti-parallel
Strand 4	B	370	372	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	57	59	first strand
Strand 2	C	51	54	anti-parallel
Strand 3	C	166	175	parallel
Strand 4	C	145	154	anti-parallel
Strand 5	C	93	104	anti-parallel
Strand 6	C	76	87	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	52	54	first strand
Strand 2	D	60	63	anti-parallel
Strand 3	D	24	28	anti-parallel
Strand 4	D	87	89	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	115	116	first strand
Strand 2	E	121	123	anti-parallel
Strand 3	E	166	168	parallel
Strand 4	E	192	194	parallel
Strand 5	E	218	220	parallel
Strand 6	E	245	246	parallel
Strand 7	E	249	250	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	270	272	first strand
Strand 2	E	383	389	parallel
Strand 3	E	394	407	anti-parallel
Strand 4	E	443	453	anti-parallel
Strand 5	E	458	468	anti-parallel
Strand 6	E	308	314	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	270	272	first strand
Strand 2	E	383	389	parallel
Strand 3	E	394	407	anti-parallel
Strand 4	E	370	372	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	57	59	first strand
Strand 2	F	51	54	anti-parallel
Strand 3	F	166	175	parallel
Strand 4	F	145	154	anti-parallel
Strand 5	F	93	104	anti-parallel
Strand 6	F	76	87	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	53	54	first strand
Strand 2	G	60	63	anti-parallel
Strand 3	G	24	28	anti-parallel
Strand 4	G	87	90	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	115	116	first strand
Strand 2	H	121	123	anti-parallel
Strand 3	H	166	168	parallel
Strand 4	H	192	194	parallel
Strand 5	H	218	220	parallel
Strand 6	H	245	246	parallel
Strand 7	H	249	250	anti-parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	270	272	first strand
Strand 2	H	383	389	parallel
Strand 3	H	394	407	anti-parallel
Strand 4	H	443	453	anti-parallel
Strand 5	H	458	469	anti-parallel
Strand 6	H	303	314	parallel
Strand 7	H	355	356	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	270	272	first strand
Strand 2	H	383	389	parallel
Strand 3	H	394	407	anti-parallel
Strand 4	H	370	372	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	57	59	first strand
Strand 2	I	51	54	anti-parallel
Strand 3	I	166	175	parallel
Strand 4	I	145	154	anti-parallel
Strand 5	I	93	104	anti-parallel
Strand 6	I	76	87	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	53	54	first strand
Strand 2	J	60	63	anti-parallel
Strand 3	J	24	28	anti-parallel
Strand 4	J	87	90	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	115	116	first strand
Strand 2	K	121	123	anti-parallel
Strand 3	K	166	168	parallel
Strand 4	K	192	194	parallel
Strand 5	K	218	220	parallel
Strand 6	K	245	246	parallel
Strand 7	K	249	250	anti-parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	270	272	first strand
Strand 2	K	383	389	parallel
Strand 3	K	394	407	anti-parallel
Strand 4	K	443	453	anti-parallel
Strand 5	K	458	469	anti-parallel
Strand 6	K	303	314	parallel
Strand 7	K	355	356	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	270	272	first strand
Strand 2	K	383	389	parallel
Strand 3	K	394	407	anti-parallel
Strand 4	K	370	372	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	57	59	first strand
Strand 2	L	51	54	anti-parallel
Strand 3	L	166	175	parallel
Strand 4	L	141	154	anti-parallel
Strand 5	L	93	105	anti-parallel
Strand 6	L	76	88	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4WWU

Analysis of interatomic Contacts of Structural Units in PDB entry:
4WWU