Analysis of interatomic Contacts of Structural Units in PDB entry:
4WXJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WXJ entry

There are 2 chains in PDB entry 4WXJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 9CYS 268
B
 PRO 8ASP 269
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 4WXJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 37Right-handed 310
Helix 2
AA2
A
41 55Right-handed alpha
Helix 3
AA3
A
79 87Right-handed alpha
Helix 4
AA4
A
100 105Right-handed alpha
Helix 5
AA5
A
130 136Right-handed alpha
Helix 6
AA6
A
148 156Right-handed alpha
Helix 7
AA7
A
159 172Right-handed alpha
Helix 8
AA8
A
180 192Right-handed alpha
Helix 9
AA9
A
201 209Right-handed alpha
Helix 10
AB1
A
236 250Right-handed alpha
Helix 11
AB2
A
251 262Right-handed alpha
Helix 12
AB3
B
34 37Right-handed 310
Helix 13
AB4
B
41 55Right-handed alpha
Helix 14
AB5
B
79 87Right-handed alpha
Helix 15
AB6
B
100 107Right-handed alpha
Helix 16
AB7
B
130 136Right-handed alpha
Helix 17
AB8
B
148 156Right-handed alpha
Helix 18
AB9
B
159 172Right-handed alpha
Helix 19
AC1
B
180 192Right-handed alpha
Helix 20
AC2
B
201 209Right-handed alpha
Helix 21
AC3
B
236 250Right-handed alpha
Helix 22
AC4
B
251 262Right-handed alpha
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There are 8 sheets in PDB entry 4WXJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 62first strand
Strand 2
A
10 15parallel
Strand 3
A
92 93parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 24first strand
Strand 2
A
39 40anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 143first strand
Strand 2
A
195 200parallel
Strand 3
A
108 123anti-parallel
Strand 4
A
214 230anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 62first strand
Strand 2
B
10 15parallel
Strand 3
B
92 93parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 24first strand
Strand 2
B
39 40anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 72first strand
Strand 2
B
77 78anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 109first strand
Strand 2
B
229 230anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 143first strand
Strand 2
B
195 200parallel
Strand 3
B
114 123anti-parallel
Strand 4
B
214 226anti-parallel
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