Analysis of interatomic Contacts of Structural Units in PDB entry:
4WXW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WXW entry

There is 1 chain in PDB entry 4WXW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 323ALA 487
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 4WXW. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
333 347Right-handed alpha
Helix 2
AA2
A
363 372Right-handed alpha
Helix 3
AA3
A
372 389Right-handed alpha
Helix 4
AA4
A
413 430Right-handed alpha
Helix 5
AA5
A
455 473Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 4WXW.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
396 401first strand
Strand 2
A
404 409anti-parallel
Strand 3
A
353 361anti-parallel
Strand 4
A
443 451anti-parallel
Strand 5
A
477 480parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il