Analysis of interatomic Contacts of Structural Units in PDB entry:
4WXY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4WXY entry

There are 24 chains in PDB entry 4WXY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 3	ALA 80
A	VAL 82	GLN 290
C	MET 1	ALA 80
C	VAL 82	GLN 290
E	ALA 2	ALA 80
E	VAL 82	GLN 290
G	MET 1	ALA 80
G	VAL 82	GLN 290
I	LEU 3	ALA 80
I	VAL 82	GLN 290
K	MET 1	ALA 80
K	VAL 82	GLN 290
B	MET 1	THR 77
B	ALA 79	ALA 189
D	MET 1	THR 77
D	ALA 79	ALA 192
F	MET 1	THR 77
F	ALA 79	SER 194
H	MET 1	THR 77
H	ALA 79	ALA 192
J	MET 1	THR 77
J	ALA 79	ALA 189
L	MET 1	THR 77
L	ALA 79	ALA 192

There are138 helices in PDB entry 4WXY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	16	Right-handed alpha
Helix 2	AA2	A	27	38	Right-handed alpha
Helix 3	AA3	A	48	56	Right-handed alpha
Helix 4	AA4	A	63	74	Right-handed alpha
Helix 5	AA5	A	86	96	Right-handed alpha
Helix 6	AA6	A	117	121	Right-handed 310
Helix 7	AA7	A	131	142	Right-handed alpha
Helix 8	AA8	A	157	177	Right-handed alpha
Helix 9	AA9	A	178	180	Right-handed 310
Helix 10	AB1	A	181	190	Right-handed alpha
Helix 11	AB2	A	192	203	Right-handed alpha
Helix 12	AB3	A	217	227	Right-handed alpha
Helix 13	AB4	A	235	240	Right-handed alpha
Helix 14	AB5	A	243	257	Right-handed alpha
Helix 15	AB6	A	260	269	Right-handed alpha
Helix 16	AB7	C	6	16	Right-handed alpha
Helix 17	AB8	C	27	38	Right-handed alpha
Helix 18	AB9	C	48	56	Right-handed alpha
Helix 19	AC1	C	63	74	Right-handed alpha
Helix 20	AC2	C	86	96	Right-handed alpha
Helix 21	AC3	C	117	121	Right-handed 310
Helix 22	AC4	C	131	141	Right-handed alpha
Helix 23	AC5	C	157	177	Right-handed alpha
Helix 24	AC6	C	178	180	Right-handed 310
Helix 25	AC7	C	181	190	Right-handed alpha
Helix 26	AC8	C	192	203	Right-handed alpha
Helix 27	AC9	C	217	227	Right-handed alpha
Helix 28	AD1	C	235	240	Right-handed alpha
Helix 29	AD2	C	243	257	Right-handed alpha
Helix 30	AD3	C	260	269	Right-handed alpha
Helix 31	AD4	E	6	16	Right-handed alpha
Helix 32	AD5	E	27	38	Right-handed alpha
Helix 33	AD6	E	48	56	Right-handed alpha
Helix 34	AD7	E	63	74	Right-handed alpha
Helix 35	AD8	E	86	96	Right-handed alpha
Helix 36	AD9	E	117	121	Right-handed 310
Helix 37	AE1	E	131	141	Right-handed alpha
Helix 38	AE2	E	157	177	Right-handed alpha
Helix 39	AE3	E	178	180	Right-handed 310
Helix 40	AE4	E	181	190	Right-handed alpha
Helix 41	AE5	E	192	203	Right-handed alpha
Helix 42	AE6	E	217	227	Right-handed alpha
Helix 43	AE7	E	235	240	Right-handed alpha
Helix 44	AE8	E	243	257	Right-handed alpha
Helix 45	AE9	E	260	269	Right-handed alpha
Helix 46	AF1	G	6	16	Right-handed alpha
Helix 47	AF2	G	27	38	Right-handed alpha
Helix 48	AF3	G	48	56	Right-handed alpha
Helix 49	AF4	G	63	74	Right-handed alpha
Helix 50	AF5	G	86	96	Right-handed alpha
Helix 51	AF6	G	117	121	Right-handed 310
Helix 52	AF7	G	131	142	Right-handed alpha
Helix 53	AF8	G	157	177	Right-handed alpha
Helix 54	AF9	G	178	180	Right-handed 310
Helix 55	AG1	G	181	190	Right-handed alpha
Helix 56	AG2	G	192	203	Right-handed alpha
Helix 57	AG3	G	217	227	Right-handed alpha
Helix 58	AG4	G	235	240	Right-handed alpha
Helix 59	AG5	G	243	257	Right-handed alpha
Helix 60	AG6	G	260	269	Right-handed alpha
Helix 61	AG7	I	6	16	Right-handed alpha
Helix 62	AG8	I	27	38	Right-handed alpha
Helix 63	AG9	I	48	56	Right-handed alpha
Helix 64	AH1	I	63	74	Right-handed alpha
Helix 65	AH2	I	86	96	Right-handed alpha
Helix 66	AH3	I	117	121	Right-handed 310
Helix 67	AH4	I	131	141	Right-handed alpha
Helix 68	AH5	I	157	177	Right-handed alpha
Helix 69	AH6	I	178	180	Right-handed 310
Helix 70	AH7	I	181	190	Right-handed alpha
Helix 71	AH8	I	192	203	Right-handed alpha
Helix 72	AH9	I	217	227	Right-handed alpha
Helix 73	AI1	I	235	240	Right-handed alpha
Helix 74	AI2	I	243	257	Right-handed alpha
Helix 75	AI3	I	260	269	Right-handed alpha
Helix 76	AI4	K	6	16	Right-handed alpha
Helix 77	AI5	K	27	38	Right-handed alpha
Helix 78	AI6	K	48	56	Right-handed alpha
Helix 79	AI7	K	63	74	Right-handed alpha
Helix 80	AI8	K	86	96	Right-handed alpha
Helix 81	AI9	K	117	121	Right-handed 310
Helix 82	AJ1	K	131	142	Right-handed alpha
Helix 83	AJ2	K	157	177	Right-handed alpha
Helix 84	AJ3	K	178	180	Right-handed 310
Helix 85	AJ4	K	181	190	Right-handed alpha
Helix 86	AJ5	K	192	203	Right-handed alpha
Helix 87	AJ6	K	217	227	Right-handed alpha
Helix 88	AJ7	K	235	240	Right-handed alpha
Helix 89	AJ8	K	243	257	Right-handed alpha
Helix 90	AJ9	K	260	268	Right-handed alpha
Helix 91	AK1	B	11	22	Right-handed alpha
Helix 92	AK2	B	31	36	Right-handed 310
Helix 93	AK3	B	47	58	Right-handed alpha
Helix 94	AK4	B	60	70	Right-handed alpha
Helix 95	AK5	B	78	84	Right-handed alpha
Helix 96	AK6	B	110	114	Right-handed 310
Helix 97	AK7	B	169	173	Right-handed 310
Helix 98	AK8	B	176	189	Right-handed alpha
Helix 99	AK9	D	11	22	Right-handed alpha
Helix 100	AL1	D	31	36	Right-handed alpha
Helix 101	AL2	D	47	58	Right-handed alpha
Helix 102	AL3	D	60	70	Right-handed alpha
Helix 103	AL4	D	78	84	Right-handed alpha
Helix 104	AL5	D	110	113	Right-handed 310
Helix 105	AL6	D	169	173	Right-handed 310
Helix 106	AL7	D	176	192	Right-handed alpha
Helix 107	AL8	F	11	22	Right-handed alpha
Helix 108	AL9	F	31	36	Right-handed 310
Helix 109	AM1	F	47	58	Right-handed alpha
Helix 110	AM2	F	60	70	Right-handed alpha
Helix 111	AM3	F	78	84	Right-handed alpha
Helix 112	AM4	F	110	113	Right-handed 310
Helix 113	AM5	F	169	173	Right-handed 310
Helix 114	AM6	F	176	193	Right-handed alpha
Helix 115	AM7	H	11	22	Right-handed alpha
Helix 116	AM8	H	31	36	Right-handed 310
Helix 117	AM9	H	47	58	Right-handed alpha
Helix 118	AN1	H	60	70	Right-handed alpha
Helix 119	AN2	H	78	84	Right-handed alpha
Helix 120	AN3	H	110	113	Right-handed 310
Helix 121	AN4	H	169	173	Right-handed 310
Helix 122	AN5	H	176	192	Right-handed alpha
Helix 123	AN6	J	11	22	Right-handed alpha
Helix 124	AN7	J	31	36	Right-handed 310
Helix 125	AN8	J	47	58	Right-handed alpha
Helix 126	AN9	J	60	70	Right-handed alpha
Helix 127	AO1	J	78	84	Right-handed alpha
Helix 128	AO2	J	110	114	Right-handed 310
Helix 129	AO3	J	169	173	Right-handed 310
Helix 130	AO4	J	176	189	Right-handed alpha
Helix 131	AO5	L	11	22	Right-handed alpha
Helix 132	AO6	L	31	36	Right-handed 310
Helix 133	AO7	L	47	58	Right-handed alpha
Helix 134	AO8	L	60	70	Right-handed alpha
Helix 135	AO9	L	78	84	Right-handed alpha
Helix 136	AP1	L	110	113	Right-handed 310
Helix 137	AP2	L	169	173	Right-handed 310
Helix 138	AP3	L	176	192	Right-handed alpha

There are 24 sheets in PDB entry 4WXY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	21	25	first strand
Strand 2	A	41	44	parallel
Strand 3	A	78	80	parallel
Strand 4	A	100	103	parallel
Strand 5	A	125	129	parallel
Strand 6	A	145	148	parallel
Strand 7	A	208	212	parallel
Strand 8	A	232	234	parallel
Strand 9	A	21	25	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	4	first strand
Strand 2	D	115	121	anti-parallel
Strand 3	D	125	132	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	208	210	first strand
Strand 2	C	145	148	parallel
Strand 3	C	125	129	parallel
Strand 4	C	100	102	parallel
Strand 5	C	78	80	parallel
Strand 6	C	41	44	parallel
Strand 7	C	21	25	parallel
Strand 8	C	232	234	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3	4	first strand
Strand 2	F	115	121	anti-parallel
Strand 3	F	125	132	anti-parallel

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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	21	25	first strand
Strand 2	E	41	44	parallel
Strand 3	E	78	80	parallel
Strand 4	E	100	103	parallel
Strand 5	E	125	129	parallel
Strand 6	E	145	148	parallel
Strand 7	E	208	212	parallel
Strand 8	E	232	234	parallel
Strand 9	E	21	25	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	3	4	first strand
Strand 2	H	115	121	anti-parallel
Strand 3	H	125	132	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	208	210	first strand
Strand 2	G	145	148	parallel
Strand 3	G	125	129	parallel
Strand 4	G	100	103	parallel
Strand 5	G	78	80	parallel
Strand 6	G	41	44	parallel
Strand 7	G	21	25	parallel
Strand 8	G	232	234	parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	208	210	first strand
Strand 2	I	145	148	parallel
Strand 3	I	125	129	parallel
Strand 4	I	100	103	parallel
Strand 5	I	78	80	parallel
Strand 6	I	41	44	parallel
Strand 7	I	21	25	parallel
Strand 8	I	232	234	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	3	4	first strand
Strand 2	L	115	119	anti-parallel
Strand 3	L	128	132	anti-parallel

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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	21	25	first strand
Strand 2	K	41	44	parallel
Strand 3	K	78	80	parallel
Strand 4	K	100	103	parallel
Strand 5	K	125	129	parallel
Strand 6	K	145	148	parallel
Strand 7	K	208	212	parallel
Strand 8	K	232	234	parallel
Strand 9	K	21	25	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	25	29	first strand
Strand 2	B	2	6	parallel
Strand 3	B	40	43	parallel
Strand 4	B	74	77	parallel
Strand 5	B	163	166	parallel
Strand 6	B	154	160	anti-parallel
Strand 7	B	146	151	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	85	88	first strand
Strand 2	B	99	104	parallel
Strand 3	B	137	141	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	115	119	first strand
Strand 2	B	128	132	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	25	29	first strand
Strand 2	D	2	6	parallel
Strand 3	D	40	43	parallel
Strand 4	D	74	77	parallel
Strand 5	D	163	166	parallel
Strand 6	D	154	160	anti-parallel
Strand 7	D	146	151	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	85	88	first strand
Strand 2	D	99	104	parallel
Strand 3	D	137	141	anti-parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	25	29	first strand
Strand 2	F	2	6	parallel
Strand 3	F	40	43	parallel
Strand 4	F	74	77	parallel
Strand 5	F	163	166	parallel
Strand 6	F	154	160	anti-parallel
Strand 7	F	146	151	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	85	88	first strand
Strand 2	F	99	104	parallel
Strand 3	F	137	141	anti-parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	25	29	first strand
Strand 2	H	2	6	parallel
Strand 3	H	40	43	parallel
Strand 4	H	74	77	parallel
Strand 5	H	163	166	parallel
Strand 6	H	154	160	anti-parallel
Strand 7	H	146	151	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	85	88	first strand
Strand 2	H	99	104	parallel
Strand 3	H	137	141	anti-parallel

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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	25	29	first strand
Strand 2	J	2	6	parallel
Strand 3	J	40	43	parallel
Strand 4	J	74	77	parallel
Strand 5	J	163	166	parallel
Strand 6	J	154	160	anti-parallel
Strand 7	J	146	151	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	85	88	first strand
Strand 2	J	99	104	parallel
Strand 3	J	137	141	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	115	121	first strand
Strand 2	J	125	132	anti-parallel

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There are 7 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	25	29	first strand
Strand 2	L	2	6	parallel
Strand 3	L	40	43	parallel
Strand 4	L	74	77	parallel
Strand 5	L	163	166	parallel
Strand 6	L	154	160	anti-parallel
Strand 7	L	146	151	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	85	88	first strand
Strand 2	L	99	104	parallel
Strand 3	L	137	141	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4WXY

Analysis of interatomic Contacts of Structural Units in PDB entry:
4WXY