Analysis of interatomic Contacts of Structural Units in PDB entry:
4WXZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4WXZ entry

There are 18 chains in PDB entry 4WXZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 18	ALA 80
A	VAL 82	THR 148
A	GLY 150	GLY 270
B	GLY 19	ALA 80
B	VAL 82	THR 148
B	GLY 150	GLY 270
C	THR 6	ALA 80
C	VAL 82	THR 148
C	GLY 150	GLY 270
D	MET 16	ALA 80
D	VAL 82	THR 148
D	GLY 150	GLY 270
E	LYS 18	ALA 80
E	VAL 82	THR 148
E	GLY 150	LYS 269
F	LYS 18	ALA 80
F	VAL 82	THR 148
F	GLY 150	GLY 270

There are 79 helices in PDB entry 4WXZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	27	38	Right-handed alpha
Helix 2	AA2	A	63	74	Right-handed alpha
Helix 3	AA3	A	86	96	Right-handed alpha
Helix 4	AA4	A	117	121	Right-handed 310
Helix 5	AA5	A	131	141	Right-handed alpha
Helix 6	AA6	A	157	176	Right-handed alpha
Helix 7	AA7	A	178	180	Right-handed 310
Helix 8	AA8	A	181	190	Right-handed alpha
Helix 9	AA9	A	192	203	Right-handed alpha
Helix 10	AB1	A	217	227	Right-handed alpha
Helix 11	AB2	A	236	241	Right-handed alpha
Helix 12	AB3	A	243	257	Right-handed alpha
Helix 13	AB4	A	260	268	Right-handed alpha
Helix 14	AB5	B	27	38	Right-handed alpha
Helix 15	AB6	B	63	74	Right-handed alpha
Helix 16	AB7	B	86	97	Right-handed alpha
Helix 17	AB8	B	117	121	Right-handed 310
Helix 18	AB9	B	131	141	Right-handed alpha
Helix 19	AC1	B	157	176	Right-handed alpha
Helix 20	AC2	B	178	180	Right-handed 310
Helix 21	AC3	B	181	190	Right-handed alpha
Helix 22	AC4	B	192	203	Right-handed alpha
Helix 23	AC5	B	217	227	Right-handed alpha
Helix 24	AC6	B	236	241	Right-handed alpha
Helix 25	AC7	B	243	257	Right-handed alpha
Helix 26	AC8	B	260	268	Right-handed alpha
Helix 27	AC9	C	7	16	Right-handed alpha
Helix 28	AD1	C	27	38	Right-handed alpha
Helix 29	AD2	C	63	74	Right-handed alpha
Helix 30	AD3	C	86	96	Right-handed alpha
Helix 31	AD4	C	117	121	Right-handed 310
Helix 32	AD5	C	131	141	Right-handed alpha
Helix 33	AD6	C	157	177	Right-handed alpha
Helix 34	AD7	C	178	180	Right-handed 310
Helix 35	AD8	C	181	190	Right-handed alpha
Helix 36	AD9	C	192	203	Right-handed alpha
Helix 37	AE1	C	217	227	Right-handed alpha
Helix 38	AE2	C	236	241	Right-handed alpha
Helix 39	AE3	C	243	257	Right-handed alpha
Helix 40	AE4	C	260	267	Right-handed alpha
Helix 41	AE5	D	27	38	Right-handed alpha
Helix 42	AE6	D	63	74	Right-handed alpha
Helix 43	AE7	D	86	96	Right-handed alpha
Helix 44	AE8	D	117	121	Right-handed 310
Helix 45	AE9	D	131	141	Right-handed alpha
Helix 46	AF1	D	157	176	Right-handed alpha
Helix 47	AF2	D	178	180	Right-handed 310
Helix 48	AF3	D	181	190	Right-handed alpha
Helix 49	AF4	D	192	203	Right-handed alpha
Helix 50	AF5	D	217	227	Right-handed alpha
Helix 51	AF6	D	236	241	Right-handed alpha
Helix 52	AF7	D	243	257	Right-handed alpha
Helix 53	AF8	D	260	268	Right-handed alpha
Helix 54	AF9	E	27	38	Right-handed alpha
Helix 55	AG1	E	63	74	Right-handed alpha
Helix 56	AG2	E	86	97	Right-handed alpha
Helix 57	AG3	E	117	121	Right-handed 310
Helix 58	AG4	E	131	141	Right-handed alpha
Helix 59	AG5	E	157	176	Right-handed alpha
Helix 60	AG6	E	178	180	Right-handed 310
Helix 61	AG7	E	181	190	Right-handed alpha
Helix 62	AG8	E	192	203	Right-handed alpha
Helix 63	AG9	E	217	227	Right-handed alpha
Helix 64	AH1	E	236	241	Right-handed alpha
Helix 65	AH2	E	243	257	Right-handed alpha
Helix 66	AH3	E	260	267	Right-handed alpha
Helix 67	AH4	F	27	38	Right-handed alpha
Helix 68	AH5	F	63	74	Right-handed alpha
Helix 69	AH6	F	86	97	Right-handed alpha
Helix 70	AH7	F	117	121	Right-handed 310
Helix 71	AH8	F	131	141	Right-handed alpha
Helix 72	AH9	F	157	177	Right-handed alpha
Helix 73	AI1	F	178	180	Right-handed 310
Helix 74	AI2	F	181	190	Right-handed alpha
Helix 75	AI3	F	192	203	Right-handed alpha
Helix 76	AI4	F	217	227	Right-handed alpha
Helix 77	AI5	F	236	241	Right-handed alpha
Helix 78	AI6	F	243	257	Right-handed alpha
Helix 79	AI7	F	260	268	Right-handed alpha

There are 6 sheets in PDB entry 4WXZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	208	210	first strand
Strand 2	A	145	148	parallel
Strand 3	A	125	129	parallel
Strand 4	A	100	103	parallel
Strand 5	A	78	80	parallel
Strand 6	A	41	44	parallel
Strand 7	A	21	25	parallel
Strand 8	A	232	234	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	208	210	first strand
Strand 2	B	145	148	parallel
Strand 3	B	125	129	parallel
Strand 4	B	100	103	parallel
Strand 5	B	78	80	parallel
Strand 6	B	41	44	parallel
Strand 7	B	21	25	parallel
Strand 8	B	232	234	parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	208	210	first strand
Strand 2	C	145	148	parallel
Strand 3	C	125	129	parallel
Strand 4	C	100	103	parallel
Strand 5	C	78	80	parallel
Strand 6	C	41	44	parallel
Strand 7	C	21	25	parallel
Strand 8	C	232	234	parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	208	210	first strand
Strand 2	D	145	148	parallel
Strand 3	D	125	129	parallel
Strand 4	D	100	103	parallel
Strand 5	D	78	80	parallel
Strand 6	D	41	44	parallel
Strand 7	D	21	25	parallel
Strand 8	D	232	234	parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	208	210	first strand
Strand 2	E	145	148	parallel
Strand 3	E	125	129	parallel
Strand 4	E	100	103	parallel
Strand 5	E	78	80	parallel
Strand 6	E	41	44	parallel
Strand 7	E	21	25	parallel
Strand 8	E	232	234	parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	208	210	first strand
Strand 2	F	145	148	parallel
Strand 3	F	125	129	parallel
Strand 4	F	100	103	parallel
Strand 5	F	78	80	parallel
Strand 6	F	41	44	parallel
Strand 7	F	21	25	parallel
Strand 8	F	232	234	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4WXZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
4WXZ