Analysis of interatomic Contacts of Structural Units in PDB entry:
4WY8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WY8 entry

There are 4 chains in PDB entry 4WY8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 3HIS 327
B
 PRO 3HIS 326
C
 PRO 3HIS 325
D
 PRO 3HIS 324
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 4WY8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 18Right-handed alpha
Helix 2
AA2
A
21 25Right-handed 310
Helix 3
AA3
A
26 40Right-handed alpha
Helix 4
AA4
A
100 112Right-handed alpha
Helix 5
AA5
A
129 144Right-handed alpha
Helix 6
AA6
A
144 151Right-handed alpha
Helix 7
AA7
A
154 158Right-handed 310
Helix 8
AA8
A
164 180Right-handed alpha
Helix 9
AA9
A
201 207Right-handed alpha
Helix 10
AB1
A
214 226Right-handed alpha
Helix 11
AB2
A
228 234Right-handed 310
Helix 12
AB3
A
238 242Right-handed 310
Helix 13
AB4
A
243 248Right-handed alpha
Helix 14
AB5
A
263 277Right-handed alpha
Helix 15
AB6
A
300 323Right-handed alpha
Helix 16
AB7
B
8 17Right-handed alpha
Helix 17
AB8
B
21 25Right-handed 310
Helix 18
AB9
B
26 40Right-handed alpha
Helix 19
AC1
B
100 112Right-handed alpha
Helix 20
AC2
B
129 144Right-handed alpha
Helix 21
AC3
B
144 151Right-handed alpha
Helix 22
AC4
B
154 158Right-handed 310
Helix 23
AC5
B
164 180Right-handed alpha
Helix 24
AC6
B
201 207Right-handed alpha
Helix 25
AC7
B
214 226Right-handed alpha
Helix 26
AC8
B
228 234Right-handed 310
Helix 27
AC9
B
238 242Right-handed 310
Helix 28
AD1
B
244 248Right-handed 310
Helix 29
AD2
B
263 277Right-handed alpha
Helix 30
AD3
B
300 322Right-handed alpha
Helix 31
AD4
C
8 17Right-handed alpha
Helix 32
AD5
C
26 40Right-handed alpha
Helix 33
AD6
C
100 112Right-handed alpha
Helix 34
AD7
C
129 144Right-handed alpha
Helix 35
AD8
C
144 151Right-handed alpha
Helix 36
AD9
C
154 158Right-handed 310
Helix 37
AE1
C
164 180Right-handed alpha
Helix 38
AE2
C
201 208Right-handed alpha
Helix 39
AE3
C
214 226Right-handed alpha
Helix 40
AE4
C
230 234Right-handed 310
Helix 41
AE5
C
238 242Right-handed 310
Helix 42
AE6
C
263 277Right-handed alpha
Helix 43
AE7
C
300 322Right-handed alpha
Helix 44
AE8
D
8 18Right-handed alpha
Helix 45
AE9
D
21 25Right-handed 310
Helix 46
AF1
D
26 41Right-handed alpha
Helix 47
AF2
D
100 112Right-handed alpha
Helix 48
AF3
D
129 144Right-handed alpha
Helix 49
AF4
D
144 151Right-handed alpha
Helix 50
AF5
D
154 158Right-handed 310
Helix 51
AF6
D
164 180Right-handed alpha
Helix 52
AF7
D
201 208Right-handed alpha
Helix 53
AF8
D
214 226Right-handed alpha
Helix 54
AF9
D
230 234Right-handed 310
Helix 55
AG1
D
238 242Right-handed 310
Helix 56
AG2
D
263 277Right-handed alpha
Helix 57
AG3
D
300 324Right-handed alpha
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There are 2 sheets in PDB entry 4WY8. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 16 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 59first strand
Strand 2
A
65 73anti-parallel
Strand 3
A
114 118anti-parallel
Strand 4
A
83 87parallel
Strand 5
A
159 163parallel
Strand 6
A
188 191parallel
Strand 7
A
253 260parallel
Strand 8
A
281 290parallel
Strand 9
B
281 290anti-parallel
Strand 10
B
253 260parallel
Strand 11
B
188 191parallel
Strand 12
B
159 163parallel
Strand 13
B
83 87parallel
Strand 14
B
114 119parallel
Strand 15
B
65 73anti-parallel
Strand 16
B
51 59anti-parallel
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There are 16 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
52 59first strand
Strand 2
C
65 72anti-parallel
Strand 3
C
114 119anti-parallel
Strand 4
C
83 87parallel
Strand 5
C
159 163parallel
Strand 6
C
188 191parallel
Strand 7
C
253 260parallel
Strand 8
C
281 290parallel
Strand 9
D
281 290anti-parallel
Strand 10
D
253 260parallel
Strand 11
D
188 191parallel
Strand 12
D
159 163parallel
Strand 13
D
83 87parallel
Strand 14
D
114 119parallel
Strand 15
D
66 73anti-parallel
Strand 16
D
51 58anti-parallel
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