Analysis of interatomic Contacts of Structural Units in PDB entry:
4WZ9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4WZ9 entry

There are 2 chains in PDB entry 4WZ9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 57	ALA 943
B	GLN 57	ARG 431

There are 80 helices in PDB entry 4WZ9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	82	85	Right-handed 310
Helix 2	AA2	A	202	206	Right-handed 310
Helix 3	AA3	A	259	263	Right-handed 310
Helix 4	AA4	A	283	289	Right-handed 310
Helix 5	AA5	A	290	309	Right-handed alpha
Helix 6	AA6	A	311	315	Right-handed 310
Helix 7	AA7	A	343	345	Right-handed 310
Helix 8	AA8	A	353	371	Right-handed alpha
Helix 9	AA9	A	381	384	Right-handed 310
Helix 10	AB1	A	385	404	Right-handed alpha
Helix 11	AB2	A	408	410	Right-handed 310
Helix 12	AB3	A	411	417	Right-handed alpha
Helix 13	AB4	A	417	426	Right-handed alpha
Helix 14	AB5	A	439	446	Right-handed alpha
Helix 15	AB6	A	452	467	Right-handed alpha
Helix 16	AB7	A	467	483	Right-handed alpha
Helix 17	AB8	A	488	499	Right-handed alpha
Helix 18	AB9	A	511	521	Right-handed alpha
Helix 19	AC1	A	601	605	Right-handed 310
Helix 20	AC2	A	613	627	Right-handed alpha
Helix 21	AC3	A	632	649	Right-handed alpha
Helix 22	AC4	A	653	662	Right-handed alpha
Helix 23	AC5	A	663	666	Right-handed 310
Helix 24	AC6	A	669	688	Right-handed alpha
Helix 25	AC7	A	692	705	Right-handed alpha
Helix 26	AC8	A	721	738	Right-handed alpha
Helix 27	AC9	A	740	757	Right-handed alpha
Helix 28	AD1	A	763	765	Right-handed 310
Helix 29	AD2	A	766	773	Right-handed alpha
Helix 30	AD3	A	779	793	Right-handed alpha
Helix 31	AD4	A	795	807	Right-handed alpha
Helix 32	AD5	A	811	822	Right-handed alpha
Helix 33	AD6	A	834	848	Right-handed alpha
Helix 34	AD7	A	849	862	Right-handed alpha
Helix 35	AD8	A	862	873	Right-handed alpha
Helix 36	AD9	A	874	888	Right-handed alpha
Helix 37	AE1	A	891	906	Right-handed alpha
Helix 38	AE2	A	907	909	Right-handed 310
Helix 39	AE3	A	910	928	Right-handed alpha
Helix 40	AE4	A	930	940	Right-handed alpha
Helix 41	AE5	B	82	85	Right-handed 310
Helix 42	AE6	B	202	206	Right-handed 310
Helix 43	AE7	B	259	263	Right-handed 310
Helix 44	AE8	B	283	289	Right-handed 310
Helix 45	AE9	B	290	309	Right-handed alpha
Helix 46	AF1	B	311	315	Right-handed 310
Helix 47	AF2	B	343	345	Right-handed 310
Helix 48	AF3	B	353	371	Right-handed alpha
Helix 49	AF4	B	381	384	Right-handed 310
Helix 50	AF5	B	385	404	Right-handed alpha
Helix 51	AF6	B	408	411	Right-handed 310
Helix 52	AF7	B	412	417	Right-handed alpha
Helix 53	AF8	B	417	426	Right-handed alpha
Helix 54	AF9	B	439	446	Right-handed alpha
Helix 55	AG1	B	452	467	Right-handed alpha
Helix 56	AG2	B	467	483	Right-handed alpha
Helix 57	AG3	B	488	499	Right-handed alpha
Helix 58	AG4	B	511	521	Right-handed alpha
Helix 59	AG5	B	601	605	Right-handed 310
Helix 60	AG6	B	613	627	Right-handed alpha
Helix 61	AG7	B	632	649	Right-handed alpha
Helix 62	AG8	B	653	662	Right-handed alpha
Helix 63	AG9	B	663	666	Right-handed 310
Helix 64	AH1	B	669	688	Right-handed alpha
Helix 65	AH2	B	692	705	Right-handed alpha
Helix 66	AH3	B	721	739	Right-handed alpha
Helix 67	AH4	B	740	757	Right-handed alpha
Helix 68	AH5	B	763	765	Right-handed 310
Helix 69	AH6	B	766	774	Right-handed alpha
Helix 70	AH7	B	779	793	Right-handed alpha
Helix 71	AH8	B	795	808	Right-handed alpha
Helix 72	AH9	B	811	822	Right-handed alpha
Helix 73	AI1	B	834	848	Right-handed alpha
Helix 74	AI2	B	849	862	Right-handed alpha
Helix 75	AI3	B	862	873	Right-handed alpha
Helix 76	AI4	B	874	888	Right-handed alpha
Helix 77	AI5	B	891	906	Right-handed alpha
Helix 78	AI6	B	907	909	Right-handed 310
Helix 79	AI7	B	910	928	Right-handed alpha
Helix 80	AI8	B	930	939	Right-handed alpha

There are 18 sheets in PDB entry 4WZ9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	132	136	first strand
Strand 2	A	114	123	anti-parallel
Strand 3	A	160	170	anti-parallel
Strand 4	A	88	99	anti-parallel
Strand 5	A	69	80	anti-parallel
Strand 6	A	218	226	parallel
Strand 7	A	247	252	anti-parallel
Strand 8	A	237	243	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	103	109	first strand
Strand 2	A	147	156	anti-parallel
Strand 3	A	138	142	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	178	184	first strand
Strand 2	A	190	196	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	230	233	first strand
Strand 2	A	265	268	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	271	275	first strand
Strand 2	A	278	282	anti-parallel
Strand 3	A	319	324	parallel
Strand 4	A	337	341	parallel
Strand 5	A	331	332	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	377	379	first strand
Strand 2	A	485	487	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	585	589	first strand
Strand 2	A	538	545	anti-parallel
Strand 3	A	526	531	anti-parallel
Strand 4	A	609	612	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	560	562	first strand
Strand 2	A	579	581	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	565	566	first strand
Strand 2	A	598	599	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	132	136	first strand
Strand 2	B	114	123	anti-parallel
Strand 3	B	160	170	anti-parallel
Strand 4	B	88	99	anti-parallel
Strand 5	B	69	80	anti-parallel
Strand 6	B	218	226	parallel
Strand 7	B	247	252	anti-parallel
Strand 8	B	237	243	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	103	109	first strand
Strand 2	B	147	156	anti-parallel
Strand 3	B	138	142	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	178	184	first strand
Strand 2	B	190	196	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	230	233	first strand
Strand 2	B	265	268	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	271	275	first strand
Strand 2	B	278	282	anti-parallel
Strand 3	B	319	324	parallel
Strand 4	B	337	341	parallel
Strand 5	B	331	332	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	377	379	first strand
Strand 2	B	485	487	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	585	589	first strand
Strand 2	B	538	545	anti-parallel
Strand 3	B	526	533	anti-parallel
Strand 4	B	609	612	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	560	562	first strand
Strand 2	B	579	581	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	565	566	first strand
Strand 2	B	598	599	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4WZ9

Analysis of interatomic Contacts of Structural Units in PDB entry:
4WZ9