Analysis of interatomic Contacts of Structural Units in PDB entry:
4WZY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WZY entry

There is 1 chain in PDB entry 4WZY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2HIS 452
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 4WZY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 10Right-handed alpha
Helix 2
AA2
A
92 105Right-handed alpha
Helix 3
AA3
A
159 171Right-handed alpha
Helix 4
AA4
A
210 220Right-handed alpha
Helix 5
AA5
A
227 253Right-handed alpha
Helix 6
AA6
A
260 275Right-handed alpha
Helix 7
AA7
A
278 292Right-handed alpha
Helix 8
AA8
A
307 309Right-handed 310
Helix 9
AA9
A
330 335Right-handed alpha
Helix 10
AB1
A
339 361Right-handed alpha
Helix 11
AB2
A
363 368Right-handed 310
Helix 12
AB3
A
370 396Right-handed alpha
Helix 13
AB4
A
402 425Right-handed alpha
Helix 14
AB5
A
426 428Right-handed 310
Helix 15
AB6
A
429 448Right-handed alpha
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There are 5 sheets in PDB entry 4WZY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 34first strand
Strand 2
A
37 46anti-parallel
Strand 3
A
51 61anti-parallel
Strand 4
A
82 88anti-parallel
Strand 5
A
73 79anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 34first strand
Strand 2
A
37 46anti-parallel
Strand 3
A
51 61anti-parallel
Strand 4
A
153 154anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 109first strand
Strand 2
A
112 116anti-parallel
Strand 3
A
179 186anti-parallel
Strand 4
A
194 202anti-parallel
Strand 5
A
146 150anti-parallel
Strand 6
A
138 142anti-parallel
Strand 7
A
128 130anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 209first strand
Strand 2
A
311 313anti-parallel
Strand 3
A
318 320anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 258first strand
Strand 2
A
296 300anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il