Analysis of interatomic Contacts of Structural Units in PDB entry:
4X2P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4X2P entry

There is 1 chain in PDB entry 4X2P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLU 3VAL 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 4X2P. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
55 57Right-handed 310
Helix 2
AA2
A
58 74Right-handed alpha
Helix 3
AA3
A
79 91Right-handed alpha
Helix 4
AA4
A
97 119Right-handed alpha
Helix 5
AA5
A
122 127Right-handed alpha
Helix 6
AA6
A
143 158Right-handed alpha
Helix 7
AA7
A
171 187Right-handed alpha
Helix 8
AA8
A
201 216Right-handed alpha
Helix 9
AA9
A
228 238Right-handed alpha
Helix 10
AB1
A
251 261Right-handed alpha
Helix 11
AB2
A
275 291Right-handed alpha
Helix 12
AB3
A
299 309Right-handed alpha
Helix 13
AB4
A
350 358Right-handed alpha
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There are 3 sheets in PDB entry 4X2P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
6 23first strand
Strand 2
A
28 41anti-parallel
Strand 3
A
46 52anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
266 267first strand
Strand 2
A
243 245parallel
Strand 3
A
220 221parallel
Strand 4
A
191 195parallel
Strand 5
A
162 166parallel
Strand 6
A
134 139parallel
Strand 7
A
316 318parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
266 267first strand
Strand 2
A
243 245parallel
Strand 3
A
220 221parallel
Strand 4
A
191 195parallel
Strand 5
A
162 166parallel
Strand 6
A
134 139parallel
Strand 7
A
336 338anti-parallel
Strand 8
A
331 333anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il