Analysis of interatomic Contacts of Structural Units in PDB entry:
4X49


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4X49 entry

There is 1 chain in PDB entry 4X49 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 235PRO 723
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 4X49. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
236 240Right-handed 310
Helix 2
AA2
A
325 329Right-handed 310
Helix 3
AA3
A
363 367Right-handed 310
Helix 4
AA4
A
491 494Right-handed 310
Helix 5
AA5
A
715 720Right-handed alpha
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There are 10 sheets in PDB entry 4X49. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
255 263first strand
Strand 2
A
269 276anti-parallel
Strand 3
A
287 294anti-parallel
Strand 4
A
305 308anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
488 489first strand
Strand 2
A
471 477anti-parallel
Strand 3
A
350 358anti-parallel
Strand 4
A
336 345anti-parallel
Strand 5
A
506 507parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 376first strand
Strand 2
A
379 386anti-parallel
Strand 3
A
396 398anti-parallel
Strand 4
A
403 406anti-parallel
Strand 5
A
411 417anti-parallel
Strand 6
A
423 425anti-parallel
Strand 7
A
428 429anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 376first strand
Strand 2
A
379 386anti-parallel
Strand 3
A
464 466anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 440first strand
Strand 2
A
443 454anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
501 503first strand
Strand 2
A
520 526anti-parallel
Strand 3
A
509 510anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
501 503first strand
Strand 2
A
520 526anti-parallel
Strand 3
A
532 537anti-parallel
Strand 4
A
545 548anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
560 564first strand
Strand 2
A
570 574anti-parallel
Strand 3
A
581 586anti-parallel
Strand 4
A
597 599anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
612 620first strand
Strand 2
A
623 630anti-parallel
Strand 3
A
641 649anti-parallel
Strand 4
A
658 667anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
678 682first strand
Strand 2
A
688 693anti-parallel
Strand 3
A
709 714anti-parallel
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