Analysis of interatomic Contacts of Structural Units in PDB entry:
4X6Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4X6Y entry

There are 2 chains in PDB entry 4X6Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 230ASP 545
B
 THR 230ASP 545
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 41 helices in PDB entry 4X6Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
233 237Right-handed 310
Helix 2
AA2
A
270 275Right-handed 310
Helix 3
AA3
A
277 284Right-handed alpha
Helix 4
AA4
A
304 308Right-handed 310
Helix 5
AA5
A
309 325Right-handed alpha
Helix 6
AA6
A
335 348Right-handed alpha
Helix 7
AA7
A
371 377Right-handed alpha
Helix 8
AA8
A
378 380Right-handed 310
Helix 9
AA9
A
381 387Right-handed alpha
Helix 10
AB1
A
391 400Right-handed alpha
Helix 11
AB2
A
400 409Right-handed alpha
Helix 12
AB3
A
411 415Right-handed 310
Helix 13
AB4
A
421 426Right-handed alpha
Helix 14
AB5
A
443 455Right-handed alpha
Helix 15
AB6
A
459 465Right-handed alpha
Helix 16
AB7
A
468 477Right-handed alpha
Helix 17
AB8
A
478 480Right-handed 310
Helix 18
AB9
A
500 505Right-handed 310
Helix 19
AC1
A
506 511Right-handed 310
Helix 20
AC2
A
525 530Right-handed alpha
Helix 21
AC3
A
530 545Right-handed alpha
Helix 22
AC4
B
233 237Right-handed 310
Helix 23
AC5
B
270 275Right-handed 310
Helix 24
AC6
B
277 284Right-handed alpha
Helix 25
AC7
B
304 308Right-handed 310
Helix 26
AC8
B
309 325Right-handed alpha
Helix 27
AC9
B
335 348Right-handed alpha
Helix 28
AD1
B
370 376Right-handed alpha
Helix 29
AD2
B
377 380Right-handed 310
Helix 30
AD3
B
381 387Right-handed alpha
Helix 31
AD4
B
391 400Right-handed alpha
Helix 32
AD5
B
400 409Right-handed alpha
Helix 33
AD6
B
411 415Right-handed 310
Helix 34
AD7
B
421 426Right-handed alpha
Helix 35
AD8
B
443 458Right-handed alpha
Helix 36
AD9
B
459 465Right-handed alpha
Helix 37
AE1
B
468 477Right-handed alpha
Helix 38
AE2
B
500 505Right-handed 310
Helix 39
AE3
B
506 510Right-handed 310
Helix 40
AE4
B
525 530Right-handed alpha
Helix 41
AE5
B
530 545Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 4X6Y.

There are 16 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
515 519first strand
Strand 2
A
488 493parallel
Strand 3
A
352 358parallel
Strand 4
A
329 334parallel
Strand 5
A
260 264parallel
Strand 6
A
287 291parallel
Strand 7
A
248 255anti-parallel
Strand 8
A
238 245anti-parallel
Strand 9
B
238 245anti-parallel
Strand 10
B
248 255anti-parallel
Strand 11
B
287 291anti-parallel
Strand 12
B
260 264parallel
Strand 13
B
329 334parallel
Strand 14
B
352 358parallel
Strand 15
B
488 493parallel
Strand 16
B
515 519parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il