Analysis of interatomic Contacts of Structural Units in PDB entry:
4XCO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4XCO entry

There are 6 chains in PDB entry 4XCO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
M
G 142 G 237
A
MET 1GLY 85
E
G 142 G 237
B
MET 1LYS 84
C
ALA 306LEU 475
D
ASP 319GLY 430
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 4XCO. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
4 9Right-handed 310
Helix 2
AA2
A
30 41Right-handed alpha
Helix 3
AA3
A
53 57Right-handed 310
Helix 4
AA4
A
71 84Right-handed alpha
Helix 5
AA5
B
4 9Right-handed 310
Helix 6
AA6
B
30 41Right-handed alpha
Helix 7
AA7
B
71 84Right-handed alpha
Helix 8
AA8
C
307 323Right-handed alpha
Helix 9
AA9
C
327 340Right-handed alpha
Helix 10
AB1
C
344 349Right-handed alpha
Helix 11
AB2
C
350 356Right-handed alpha
Helix 12
AB3
C
359 364Right-handed alpha
Helix 13
AB4
C
366 378Right-handed alpha
Helix 14
AB5
C
381 387Right-handed alpha
Helix 15
AB6
C
393 402Right-handed alpha
Helix 16
AB7
C
406 430Right-handed alpha
Helix 17
AB8
C
436 446Right-handed alpha
Helix 18
AB9
C
462 474Right-handed alpha
Helix 19
AC1
D
327 345Right-handed alpha
Helix 20
AC2
D
366 378Right-handed alpha
Helix 21
AC3
D
381 387Right-handed alpha
Helix 22
AC4
D
392 404Right-handed alpha
Helix 23
AC5
D
406 430Right-handed alpha
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There are 2 sheets in PDB entry 4XCO. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2 3first strand
Strand 2
A
63 65anti-parallel
Strand 3
A
46 48anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
2 3first strand
Strand 2
B
63 65anti-parallel
Strand 3
B
46 48anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il