Analysis of interatomic Contacts of Structural Units in PDB entry:
4XCQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4XCQ entry

There is 1 chain in PDB entry 4XCQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
HIS 0ARG 306
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4XCQ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
1 3Right-handed 310
Helix 2
AA2
A
11 25Right-handed alpha
Helix 3
AA3
A
36 42Right-handed alpha
Helix 4
AA4
A
61 70Right-handed alpha
Helix 5
AA5
A
72 84Right-handed alpha
Helix 6
AA6
A
99 116Right-handed alpha
Helix 7
AA7
A
133 151Right-handed alpha
Helix 8
AA8
A
169 186Right-handed alpha
Helix 9
AA9
A
197 206Right-handed alpha
Helix 10
AB1
A
221 233Right-handed alpha
Helix 11
AB2
A
255 264Right-handed alpha
Helix 12
AB3
A
288 305Right-handed alpha
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There are 2 sheets in PDB entry 4XCQ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
29 30first strand
Strand 2
A
5 9parallel
Strand 3
A
89 95parallel
Strand 4
A
120 127parallel
Strand 5
A
158 163parallel
Strand 6
A
209 215parallel
Strand 7
A
279 285anti-parallel
Strand 8
A
245 250anti-parallel
Strand 9
A
268 273parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
32 34first strand
Strand 2
A
49 51parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il