Analysis of interatomic Contacts of Structural Units in PDB entry:
4XIG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4XIG entry

There are 4 chains in PDB entry 4XIG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
M	GLU 25	VAL 323
N	LEU 2	VAL 291
S	MET 1	TYR 363
Q	LYS 1	THR 320

There are 82 helices in PDB entry 4XIG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	M	25	52	Right-handed alpha
Helix 2	AA2	M	53	62	Right-handed alpha
Helix 3	AA3	M	81	88	Right-handed alpha
Helix 4	AA4	M	92	111	Right-handed alpha
Helix 5	AA5	M	111	123	Right-handed alpha
Helix 6	AA6	M	126	139	Right-handed alpha
Helix 7	AA7	M	140	143	Right-handed 310
Helix 8	AA8	M	144	156	Right-handed alpha
Helix 9	AA9	M	161	170	Right-handed alpha
Helix 10	AB1	M	183	209	Right-handed alpha
Helix 11	AB2	M	213	222	Right-handed alpha
Helix 12	AB3	M	225	233	Right-handed alpha
Helix 13	AB4	M	233	252	Right-handed alpha
Helix 14	AB5	M	257	265	Right-handed alpha
Helix 15	AB6	M	269	274	Right-handed alpha
Helix 16	AB7	M	275	285	Right-handed alpha
Helix 17	AB8	M	289	318	Right-handed alpha
Helix 18	AB9	N	8	42	Right-handed alpha
Helix 19	AC1	N	43	50	Right-handed alpha
Helix 20	AC2	N	62	69	Right-handed alpha
Helix 21	AC3	N	70	104	Right-handed alpha
Helix 22	AC4	N	109	123	Right-handed alpha
Helix 23	AC5	N	126	136	Right-handed alpha
Helix 24	AC6	N	142	148	Right-handed alpha
Helix 25	AC7	N	153	166	Right-handed alpha
Helix 26	AC8	N	169	179	Right-handed alpha
Helix 27	AC9	N	182	189	Right-handed alpha
Helix 28	AD1	N	189	194	Right-handed alpha
Helix 29	AD2	N	194	211	Right-handed alpha
Helix 30	AD3	N	213	220	Right-handed alpha
Helix 31	AD4	N	222	226	Right-handed 310
Helix 32	AD5	N	227	236	Right-handed alpha
Helix 33	AD6	N	242	247	Right-handed alpha
Helix 34	AD7	N	255	284	Right-handed alpha
Helix 35	AD8	S	42	52	Right-handed alpha
Helix 36	AD9	S	92	98	Right-handed alpha
Helix 37	AE1	S	98	104	Right-handed alpha
Helix 38	AE2	S	107	123	Right-handed alpha
Helix 39	AE3	S	125	130	Right-handed 310
Helix 40	AE4	S	136	150	Right-handed alpha
Helix 41	AE5	S	166	184	Right-handed alpha
Helix 42	AE6	S	194	202	Right-handed alpha
Helix 43	AE7	S	218	225	Right-handed alpha
Helix 44	AE8	S	228	235	Right-handed alpha
Helix 45	AE9	S	284	286	Right-handed 310
Helix 46	AF1	Q	29	40	Right-handed alpha
Helix 47	AF2	Q	53	64	Right-handed alpha
Helix 48	AF3	Q	76	86	Right-handed alpha
Helix 49	AF4	Q	92	100	Right-handed alpha
Helix 50	AF5	Q	100	110	Right-handed alpha
Helix 51	AF6	Q	110	118	Right-handed alpha
Helix 52	AF7	Q	144	147	Right-handed 310
Helix 53	AF8	Q	156	169	Right-handed alpha
Helix 54	AF9	Q	189	194	Right-handed alpha
Helix 55	AG1	Q	195	199	Right-handed 310
Helix 56	AG2	Q	226	240	Right-handed alpha
Helix 57	AG3	Q	250	253	Right-handed 310
Helix 58	AG4	Q	254	259	Right-handed alpha
Helix 59	AG5	Q	270	281	Right-handed alpha
Helix 60	AG6	Q	325	336	Right-handed alpha
Helix 61	AG7	Q	338	348	Right-handed alpha
Helix 62	AG8	Q	364	369	Right-handed alpha
Helix 63	AG9	Q	373	382	Right-handed alpha
Helix 64	AH1	Q	392	400	Right-handed alpha
Helix 65	AH2	Q	401	415	Right-handed alpha
Helix 66	AH3	Q	427	454	Right-handed alpha
Helix 67	AH4	Q	458	473	Right-handed alpha
Helix 68	AH5	Q	474	490	Right-handed alpha
Helix 69	AH6	T	42	52	Right-handed alpha
Helix 70	AH7	T	72	76	Right-handed 310
Helix 71	AH8	T	92	98	Right-handed alpha
Helix 72	AH9	T	98	103	Right-handed alpha
Helix 73	AI1	T	106	110	Right-handed 310
Helix 74	AI2	T	111	122	Right-handed alpha
Helix 75	AI3	T	125	129	Right-handed 310
Helix 76	AI4	T	131	135	Right-handed 310
Helix 77	AI5	T	136	150	Right-handed alpha
Helix 78	AI6	T	166	184	Right-handed alpha
Helix 79	AI7	T	194	202	Right-handed alpha
Helix 80	AI8	T	218	225	Right-handed alpha
Helix 81	AI9	T	228	235	Right-handed alpha
Helix 82	AJ1	T	284	286	Right-handed 310

There are 15 sheets in PDB entry 4XIG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	20	27	first strand
Strand 2	S	5	12	anti-parallel
Strand 3	S	58	63	anti-parallel
Strand 4	S	66	67	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	78	81	first strand
Strand 2	S	155	159	parallel
Strand 3	S	187	192	parallel
Strand 4	S	32	36	parallel
Strand 5	S	204	209	parallel
Strand 6	S	212	217	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	261	264	first strand
Strand 2	S	254	257	anti-parallel
Strand 3	S	243	246	anti-parallel
Strand 4	S	279	282	anti-parallel
Strand 5	S	352	355	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	288	290	first strand
Strand 2	S	341	346	anti-parallel
Strand 3	S	302	310	anti-parallel
Strand 4	S	315	321	anti-parallel
Strand 5	S	324	330	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	23	24	first strand
Strand 2	Q	11	19	anti-parallel
Strand 3	Q	41	45	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	23	24	first strand
Strand 2	Q	11	19	anti-parallel
Strand 3	Q	70	74	parallel
Strand 4	Q	315	319	anti-parallel
Strand 5	Q	126	128	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	181	184	first strand
Strand 2	Q	264	267	parallel
Strand 3	Q	140	142	anti-parallel
Strand 4	Q	290	292	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	212	214	first strand
Strand 2	Q	217	219	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	354	357	first strand
Strand 2	Q	360	363	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	23	27	first strand
Strand 2	T	5	11	anti-parallel
Strand 3	T	58	63	anti-parallel
Strand 4	T	66	67	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	13	14	first strand
Strand 2	T	17	18	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	78	81	first strand
Strand 2	T	155	159	parallel
Strand 3	T	187	192	parallel
Strand 4	T	32	36	parallel
Strand 5	T	204	208	parallel
Strand 6	T	213	217	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	241	245	first strand
Strand 2	T	279	283	anti-parallel
Strand 3	T	352	355	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	255	256	first strand
Strand 2	T	262	263	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	288	290	first strand
Strand 2	T	341	346	anti-parallel
Strand 3	T	300	310	anti-parallel
Strand 4	T	314	320	anti-parallel
Strand 5	T	325	331	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4XIG

Analysis of interatomic Contacts of Structural Units in PDB entry:
4XIG