Analysis of interatomic Contacts of Structural Units in PDB entry:
4XJ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4XJ6 entry

There is 1 chain in PDB entry 4XJ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2SER 406
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 4XJ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 11Right-handed alpha
Helix 2
AA2
A
15 21Right-handed alpha
Helix 3
AA3
A
23 58Right-handed alpha
Helix 4
AA4
A
61 70Right-handed alpha
Helix 5
AA5
A
71 77Right-handed 310
Helix 6
AA6
A
78 91Right-handed alpha
Helix 7
AA7
A
93 103Right-handed alpha
Helix 8
AA8
A
111 114Right-handed 310
Helix 9
AA9
A
148 167Right-handed alpha
Helix 10
AB1
A
237 240Right-handed 310
Helix 11
AB2
A
256 272Right-handed alpha
Helix 12
AB3
A
273 290Right-handed alpha
Helix 13
AB4
A
296 311Right-handed alpha
Helix 14
AB5
A
317 336Right-handed alpha
Helix 15
AB6
A
351 355Right-handed 310
Helix 16
AB7
A
356 378Right-handed alpha
Helix 17
AB8
A
381 394Right-handed alpha
Helix 18
AB9
A
399 403Right-handed 310
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There are 3 sheets in PDB entry 4XJ6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 4first strand
Strand 2
A
404 405anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 110first strand
Strand 2
A
128 138anti-parallel
Strand 3
A
188 192parallel
Strand 4
A
179 183anti-parallel
Strand 5
A
170 174anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 110first strand
Strand 2
A
128 138anti-parallel
Strand 3
A
194 198parallel
Strand 4
A
242 244anti-parallel
Strand 5
A
252 254anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il