Analysis of interatomic Contacts of Structural Units in PDB entry:
4XM0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4XM0 entry

There are 6 chains in PDB entry 4XM0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 4ILE 267
B
ASN 13ILE 267
C
SER 6ILE 267
D
SER 6ILE 267
E
SER 6ILE 267
F
ASN 4ILE 267
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 4XM0. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
7 18Right-handed alpha
Helix 2
AA2
A
42 58Right-handed alpha
Helix 3
AA3
A
80 100Right-handed alpha
Helix 4
AA4
A
117 131Right-handed alpha
Helix 5
AA5
A
148 166Right-handed alpha
Helix 6
AA6
A
171 176Right-handed alpha
Helix 7
AA7
A
203 206Right-handed 310
Helix 8
AA8
A
207 214Right-handed alpha
Helix 9
AA9
A
223 241Right-handed alpha
Helix 10
AB1
A
254 259Right-handed 310
Helix 11
AB2
A
263 267Right-handed 310
Helix 12
AB3
B
42 58Right-handed alpha
Helix 13
AB4
B
80 98Right-handed alpha
Helix 14
AB5
B
117 132Right-handed alpha
Helix 15
AB6
B
148 165Right-handed alpha
Helix 16
AB7
B
171 176Right-handed alpha
Helix 17
AB8
B
204 214Right-handed alpha
Helix 18
AB9
B
220 241Right-handed alpha
Helix 19
AC1
B
263 267Right-handed 310
Helix 20
AC2
C
7 18Right-handed alpha
Helix 21
AC3
C
44 57Right-handed alpha
Helix 22
AC4
C
80 97Right-handed alpha
Helix 23
AC5
C
98 100Right-handed 310
Helix 24
AC6
C
117 132Right-handed alpha
Helix 25
AC7
C
148 166Right-handed alpha
Helix 26
AC8
C
171 177Right-handed alpha
Helix 27
AC9
C
204 212Right-handed alpha
Helix 28
AD1
C
220 240Right-handed alpha
Helix 29
AD2
C
263 267Right-handed 310
Helix 30
AD3
D
9 17Right-handed alpha
Helix 31
AD4
D
42 48Right-handed alpha
Helix 32
AD5
D
48 57Right-handed alpha
Helix 33
AD6
D
80 98Right-handed alpha
Helix 34
AD7
D
117 132Right-handed alpha
Helix 35
AD8
D
148 166Right-handed alpha
Helix 36
AD9
D
172 177Right-handed alpha
Helix 37
AE1
D
204 214Right-handed alpha
Helix 38
AE2
D
220 240Right-handed alpha
Helix 39
AE3
D
254 259Right-handed 310
Helix 40
AE4
D
263 267Right-handed 310
Helix 41
AE5
E
7 17Right-handed alpha
Helix 42
AE6
E
42 57Right-handed alpha
Helix 43
AE7
E
80 92Right-handed alpha
Helix 44
AE8
E
92 97Right-handed alpha
Helix 45
AE9
E
117 132Right-handed alpha
Helix 46
AF1
E
148 166Right-handed alpha
Helix 47
AF2
E
171 176Right-handed alpha
Helix 48
AF3
E
204 214Right-handed alpha
Helix 49
AF4
E
223 238Right-handed alpha
Helix 50
AF5
E
263 267Right-handed 310
Helix 51
AF6
F
7 18Right-handed alpha
Helix 52
AF7
F
42 55Right-handed alpha
Helix 53
AF8
F
80 98Right-handed alpha
Helix 54
AF9
F
117 132Right-handed alpha
Helix 55
AG1
F
148 166Right-handed alpha
Helix 56
AG2
F
171 176Right-handed alpha
Helix 57
AG3
F
204 214Right-handed alpha
Helix 58
AG4
F
220 240Right-handed alpha
Helix 59
AG5
F
241 243Right-handed 310
Helix 60
AG6
F
254 259Right-handed 310
Helix 61
AG7
F
263 267Right-handed 310
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There are 7 sheets in PDB entry 4XM0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
101 109first strand
Strand 2
A
61 68parallel
Strand 3
A
33 38parallel
Strand 4
A
135 139parallel
Strand 5
A
186 190parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
197 200first strand
Strand 2
A
247 250anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
101 109first strand
Strand 2
B
61 68parallel
Strand 3
B
33 38parallel
Strand 4
B
135 139parallel
Strand 5
B
186 190parallel
Strand 6
B
247 252anti-parallel
Strand 7
B
197 200anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
104 109first strand
Strand 2
C
61 68parallel
Strand 3
C
33 38parallel
Strand 4
C
135 139parallel
Strand 5
C
186 190parallel
Strand 6
C
247 253anti-parallel
Strand 7
C
197 200anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
104 109first strand
Strand 2
D
61 68parallel
Strand 3
D
33 38parallel
Strand 4
D
135 139parallel
Strand 5
D
186 190parallel
Strand 6
D
247 252anti-parallel
Strand 7
D
197 200anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
104 109first strand
Strand 2
E
61 68parallel
Strand 3
E
33 38parallel
Strand 4
E
135 139parallel
Strand 5
E
186 190parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
101 109first strand
Strand 2
F
61 68parallel
Strand 3
F
33 38parallel
Strand 4
F
135 139parallel
Strand 5
F
186 190parallel
Strand 6
F
247 252anti-parallel
Strand 7
F
197 200anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il