Analysis of interatomic Contacts of Structural Units in PDB entry:
4XMU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4XMU entry

There is 1 chain in PDB entry 4XMU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 5ALA 870
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 4XMU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 13Right-handed 310
Helix 2
AA2
A
99 103Right-handed 310
Helix 3
AA3
A
124 128Right-handed 310
Helix 4
AA4
A
185 187Right-handed 310
Helix 5
AA5
A
219 222Right-handed 310
Helix 6
AA6
A
223 242Right-handed alpha
Helix 7
AA7
A
274 276Right-handed 310
Helix 8
AA8
A
284 301Right-handed alpha
Helix 9
AA9
A
312 314Right-handed 310
Helix 10
AB1
A
315 335Right-handed alpha
Helix 11
AB2
A
336 351Right-handed alpha
Helix 12
AB3
A
351 358Right-handed alpha
Helix 13
AB4
A
371 376Right-handed 310
Helix 14
AB5
A
377 396Right-handed alpha
Helix 15
AB6
A
396 412Right-handed alpha
Helix 16
AB7
A
417 430Right-handed alpha
Helix 17
AB8
A
437 442Right-handed alpha
Helix 18
AB9
A
547 558Right-handed alpha
Helix 19
AC1
A
560 585Right-handed alpha
Helix 20
AC2
A
592 605Right-handed alpha
Helix 21
AC3
A
609 617Right-handed alpha
Helix 22
AC4
A
621 627Right-handed alpha
Helix 23
AC5
A
633 652Right-handed alpha
Helix 24
AC6
A
652 663Right-handed alpha
Helix 25
AC7
A
671 691Right-handed alpha
Helix 26
AC8
A
692 707Right-handed alpha
Helix 27
AC9
A
709 723Right-handed alpha
Helix 28
AD1
A
727 740Right-handed alpha
Helix 29
AD2
A
742 755Right-handed alpha
Helix 30
AD3
A
760 769Right-handed alpha
Helix 31
AD4
A
778 793Right-handed alpha
Helix 32
AD5
A
793 798Right-handed alpha
Helix 33
AD6
A
802 819Right-handed alpha
Helix 34
AD7
A
819 827Right-handed alpha
Helix 35
AD8
A
827 832Right-handed alpha
Helix 36
AD9
A
833 836Right-handed 310
Helix 37
AE1
A
837 853Right-handed alpha
Helix 38
AE2
A
858 870Right-handed alpha
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There are 8 sheets in PDB entry 4XMU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 9first strand
Strand 2
A
368 369anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 70first strand
Strand 2
A
60 66anti-parallel
Strand 3
A
89 98anti-parallel
Strand 4
A
34 44anti-parallel
Strand 5
A
18 28anti-parallel
Strand 6
A
138 148parallel
Strand 7
A
171 183anti-parallel
Strand 8
A
160 167anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 55first strand
Strand 2
A
80 83anti-parallel
Strand 3
A
74 77anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 112first strand
Strand 2
A
115 119anti-parallel
Strand 3
A
189 192anti-parallel
Strand 4
A
154 157anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 202first strand
Strand 2
A
208 215anti-parallel
Strand 3
A
249 255parallel
Strand 4
A
268 272parallel
Strand 5
A
262 263anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
309 310first strand
Strand 2
A
415 416parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
516 521first strand
Strand 2
A
460 468anti-parallel
Strand 3
A
447 455anti-parallel
Strand 4
A
541 543parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
509 512first strand
Strand 2
A
483 490anti-parallel
Strand 3
A
529 532anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il