Analysis of interatomic Contacts of Structural Units in PDB entry:
4XQM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4XQM entry

There is 1 chain in PDB entry 4XQM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
TYR 357SER 450
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There is 1 helix in PDB entry 4XQM. Click on helix number for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
446 449Right-handed 310
Back to top of page

There is 1 sheet (AA1) in PDB entry 4XQM.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
364 369first strand
Strand 2
A
372 377anti-parallel
Strand 3
A
381 384anti-parallel
Strand 4
A
387 396anti-parallel
Strand 5
A
399 404anti-parallel
Strand 6
A
415 422anti-parallel
Strand 7
A
438 445parallel
Strand 8
A
427 435anti-parallel
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il