Analysis of interatomic Contacts of Structural Units in PDB entry:
4XR6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4XR6 entry

There is 1 chain in PDB entry 4XR6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 113VAL 709
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4XR6. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
113 120Right-handed alpha
Helix 2
AA2
A
122 126Right-handed 310
Helix 3
AA3
A
130 134Right-handed 310
Helix 4
AA4
A
142 147Right-handed alpha
Helix 5
AA5
A
151 155Right-handed 310
Helix 6
AA6
A
172 186Right-handed alpha
Helix 7
AA7
A
206 212Right-handed 310
Helix 8
AA8
A
234 237Right-handed 310
Helix 9
AA9
A
251 255Right-handed 310
Helix 10
AB1
A
363 367Right-handed alpha
Helix 11
AB2
A
397 401Right-handed 310
Helix 12
AB3
A
619 623Right-handed 310
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There are 10 sheets in PDB entry 4XR6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
128 130first strand
Strand 2
A
139 141anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
189 193first strand
Strand 2
A
222 226parallel
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There are 11 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
198 201first strand
Strand 2
A
229 232parallel
Strand 3
A
268 270parallel
Strand 4
A
300 302parallel
Strand 5
A
327 329parallel
Strand 6
A
356 358parallel
Strand 7
A
384 388parallel
Strand 8
A
417 420parallel
Strand 9
A
448 451parallel
Strand 10
A
489 492parallel
Strand 11
A
517 519parallel
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There are 10 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
261 264first strand
Strand 2
A
294 297parallel
Strand 3
A
321 324parallel
Strand 4
A
350 353parallel
Strand 5
A
378 381parallel
Strand 6
A
411 414parallel
Strand 7
A
442 445parallel
Strand 8
A
483 486parallel
Strand 9
A
511 514parallel
Strand 10
A
538 540parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
310 312first strand
Strand 2
A
343 345parallel
Strand 3
A
371 373parallel
Strand 4
A
392 396parallel
Strand 5
A
425 429parallel
Strand 6
A
465 467parallel
Strand 7
A
502 504parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
407 409first strand
Strand 2
A
438 440parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
594 596first strand
Strand 2
A
564 568parallel
Strand 3
A
533 536parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
571 574first strand
Strand 2
A
598 602parallel
Strand 3
A
626 637parallel
Strand 4
A
698 707anti-parallel
Strand 5
A
659 662anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
587 589first strand
Strand 2
A
614 616parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
636 638first strand
Strand 2
A
643 649anti-parallel
Strand 3
A
686 691anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il