Analysis of interatomic Contacts of Structural Units in PDB entry:
4XT9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4XT9 entry

There are 2 chains in PDB entry 4XT9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 265SER 507
B
LYS 688GLN 695
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 4XT9. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
266 283Right-handed alpha
Helix 2
AA2
A
288 295Right-handed alpha
Helix 3
AA3
A
301 311Right-handed alpha
Helix 4
AA4
A
312 338Right-handed alpha
Helix 5
AA5
A
345 365Right-handed alpha
Helix 6
AA6
A
384 392Right-handed 310
Helix 7
AA7
A
393 409Right-handed alpha
Helix 8
AA8
A
413 426Right-handed alpha
Helix 9
AA9
A
435 457Right-handed alpha
Helix 10
AB1
A
459 466Right-handed 310
Helix 11
AB2
A
468 490Right-handed alpha
Helix 12
AB3
A
490 498Right-handed alpha
Helix 13
AB4
A
499 507Right-handed alpha
Helix 14
AB5
B
689 695Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 4XT9.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
369 370first strand
Strand 2
A
375 378anti-parallel
Strand 3
A
381 383anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il