Analysis of interatomic Contacts of Structural Units in PDB entry:
4XUV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4XUV entry

There are 2 chains in PDB entry 4XUV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 6ILE 378
B
 GLY 8ILE 378
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 4XUV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 26Right-handed alpha
Helix 2
AA2
A
55 71Right-handed alpha
Helix 3
AA3
A
72 89Right-handed alpha
Helix 4
AA4
A
97 100Right-handed 310
Helix 5
AA5
A
101 113Right-handed alpha
Helix 6
AA6
A
114 116Right-handed 310
Helix 7
AA7
A
117 131Right-handed alpha
Helix 8
AA8
A
135 139Right-handed 310
Helix 9
AA9
A
156 161Right-handed alpha
Helix 10
AB1
A
161 172Right-handed alpha
Helix 11
AB2
A
174 193Right-handed alpha
Helix 12
AB3
A
221 243Right-handed alpha
Helix 13
AB4
A
246 268Right-handed alpha
Helix 14
AB5
A
282 286Right-handed 310
Helix 15
AB6
A
291 307Right-handed alpha
Helix 16
AB7
A
311 313Right-handed 310
Helix 17
AB8
A
314 328Right-handed alpha
Helix 18
AB9
A
359 375Right-handed alpha
Helix 19
AC1
A
376 378Right-handed 310
Helix 20
AC2
B
9 26Right-handed alpha
Helix 21
AC3
B
53 71Right-handed alpha
Helix 22
AC4
B
72 89Right-handed alpha
Helix 23
AC5
B
97 99Right-handed 310
Helix 24
AC6
B
100 113Right-handed alpha
Helix 25
AC7
B
114 116Right-handed 310
Helix 26
AC8
B
117 131Right-handed alpha
Helix 27
AC9
B
135 139Right-handed 310
Helix 28
AD1
B
156 161Right-handed alpha
Helix 29
AD2
B
161 172Right-handed alpha
Helix 30
AD3
B
174 193Right-handed alpha
Helix 31
AD4
B
221 243Right-handed alpha
Helix 32
AD5
B
246 268Right-handed alpha
Helix 33
AD6
B
282 286Right-handed 310
Helix 34
AD7
B
291 307Right-handed alpha
Helix 35
AD8
B
311 313Right-handed 310
Helix 36
AD9
B
314 329Right-handed alpha
Helix 37
AE1
B
358 375Right-handed alpha
Helix 38
AE2
B
376 378Right-handed 310
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There are 4 sheets in PDB entry 4XUV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 154first strand
Strand 2
A
203 206anti-parallel
Strand 3
A
213 215anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 276first strand
Strand 2
A
289 290anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
152 154first strand
Strand 2
B
203 206anti-parallel
Strand 3
B
213 215anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
275 276first strand
Strand 2
B
289 290anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il