Analysis of interatomic Contacts of Structural Units in PDB entry:
4XVC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4XVC entry

There are 8 chains in PDB entry 4XVC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLY 297
B	MET 1	GLY 297
C	MET 1	GLY 297
D	MET 1	GLY 297
E	MET 1	GLY 297
F	MET 1	GLY 297
G	MET 1	GLY 297
H	MET 1	GLY 297

There are 96 helices in PDB entry 4XVC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	4	20	Right-handed alpha
Helix 2	AA2	A	24	37	Right-handed alpha
Helix 3	AA3	A	83	99	Right-handed alpha
Helix 4	AA4	A	116	132	Right-handed alpha
Helix 5	AA5	A	135	137	Right-handed 310
Helix 6	AA6	A	145	161	Right-handed alpha
Helix 7	AA7	A	183	188	Right-handed alpha
Helix 8	AA8	A	196	209	Right-handed alpha
Helix 9	AA9	A	219	223	Right-handed 310
Helix 10	AB1	A	241	255	Right-handed alpha
Helix 11	AB2	A	270	275	Right-handed 310
Helix 12	AB3	A	278	297	Right-handed alpha
Helix 13	AB4	B	4	20	Right-handed alpha
Helix 14	AB5	B	24	37	Right-handed alpha
Helix 15	AB6	B	83	99	Right-handed alpha
Helix 16	AB7	B	116	132	Right-handed alpha
Helix 17	AB8	B	135	137	Right-handed 310
Helix 18	AB9	B	145	161	Right-handed alpha
Helix 19	AC1	B	183	188	Right-handed alpha
Helix 20	AC2	B	196	209	Right-handed alpha
Helix 21	AC3	B	219	223	Right-handed 310
Helix 22	AC4	B	241	255	Right-handed alpha
Helix 23	AC5	B	270	275	Right-handed 310
Helix 24	AC6	B	278	297	Right-handed alpha
Helix 25	AC7	C	4	20	Right-handed alpha
Helix 26	AC8	C	24	37	Right-handed alpha
Helix 27	AC9	C	83	99	Right-handed alpha
Helix 28	AD1	C	116	132	Right-handed alpha
Helix 29	AD2	C	135	137	Right-handed 310
Helix 30	AD3	C	145	161	Right-handed alpha
Helix 31	AD4	C	183	188	Right-handed alpha
Helix 32	AD5	C	196	209	Right-handed alpha
Helix 33	AD6	C	219	223	Right-handed 310
Helix 34	AD7	C	241	255	Right-handed alpha
Helix 35	AD8	C	270	275	Right-handed 310
Helix 36	AD9	C	278	297	Right-handed alpha
Helix 37	AE1	D	4	20	Right-handed alpha
Helix 38	AE2	D	24	37	Right-handed alpha
Helix 39	AE3	D	83	99	Right-handed alpha
Helix 40	AE4	D	116	132	Right-handed alpha
Helix 41	AE5	D	135	137	Right-handed 310
Helix 42	AE6	D	145	161	Right-handed alpha
Helix 43	AE7	D	183	188	Right-handed alpha
Helix 44	AE8	D	196	209	Right-handed alpha
Helix 45	AE9	D	219	223	Right-handed 310
Helix 46	AF1	D	241	255	Right-handed alpha
Helix 47	AF2	D	270	275	Right-handed 310
Helix 48	AF3	D	278	296	Right-handed alpha
Helix 49	AF4	E	4	20	Right-handed alpha
Helix 50	AF5	E	24	37	Right-handed alpha
Helix 51	AF6	E	83	99	Right-handed alpha
Helix 52	AF7	E	116	132	Right-handed alpha
Helix 53	AF8	E	135	137	Right-handed 310
Helix 54	AF9	E	145	161	Right-handed alpha
Helix 55	AG1	E	183	188	Right-handed alpha
Helix 56	AG2	E	196	209	Right-handed alpha
Helix 57	AG3	E	219	223	Right-handed 310
Helix 58	AG4	E	241	255	Right-handed alpha
Helix 59	AG5	E	270	275	Right-handed 310
Helix 60	AG6	E	278	297	Right-handed alpha
Helix 61	AG7	F	4	20	Right-handed alpha
Helix 62	AG8	F	24	37	Right-handed alpha
Helix 63	AG9	F	83	99	Right-handed alpha
Helix 64	AH1	F	116	132	Right-handed alpha
Helix 65	AH2	F	135	137	Right-handed 310
Helix 66	AH3	F	145	161	Right-handed alpha
Helix 67	AH4	F	183	188	Right-handed alpha
Helix 68	AH5	F	196	209	Right-handed alpha
Helix 69	AH6	F	219	223	Right-handed 310
Helix 70	AH7	F	241	255	Right-handed alpha
Helix 71	AH8	F	270	275	Right-handed 310
Helix 72	AH9	F	278	297	Right-handed alpha
Helix 73	AI1	G	4	20	Right-handed alpha
Helix 74	AI2	G	24	37	Right-handed alpha
Helix 75	AI3	G	83	99	Right-handed alpha
Helix 76	AI4	G	116	132	Right-handed alpha
Helix 77	AI5	G	135	137	Right-handed 310
Helix 78	AI6	G	145	161	Right-handed alpha
Helix 79	AI7	G	183	188	Right-handed alpha
Helix 80	AI8	G	196	209	Right-handed alpha
Helix 81	AI9	G	219	223	Right-handed 310
Helix 82	AJ1	G	241	255	Right-handed alpha
Helix 83	AJ2	G	270	275	Right-handed 310
Helix 84	AJ3	G	278	297	Right-handed alpha
Helix 85	AJ4	H	4	20	Right-handed alpha
Helix 86	AJ5	H	24	37	Right-handed alpha
Helix 87	AJ6	H	83	99	Right-handed alpha
Helix 88	AJ7	H	116	132	Right-handed alpha
Helix 89	AJ8	H	135	137	Right-handed 310
Helix 90	AJ9	H	145	161	Right-handed alpha
Helix 91	AK1	H	183	188	Right-handed alpha
Helix 92	AK2	H	196	209	Right-handed alpha
Helix 93	AK3	H	219	223	Right-handed 310
Helix 94	AK4	H	241	255	Right-handed alpha
Helix 95	AK5	H	270	275	Right-handed 310
Helix 96	AK6	H	278	296	Right-handed alpha

There are 8 sheets in PDB entry 4XVC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	52	first strand
Strand 2	A	55	61	anti-parallel
Strand 3	A	100	105	anti-parallel
Strand 4	A	66	74	parallel
Strand 5	A	139	144	parallel
Strand 6	A	168	172	parallel
Strand 7	A	231	236	parallel
Strand 8	A	259	264	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	52	first strand
Strand 2	B	55	61	anti-parallel
Strand 3	B	100	105	anti-parallel
Strand 4	B	66	74	parallel
Strand 5	B	139	144	parallel
Strand 6	B	168	172	parallel
Strand 7	B	231	236	parallel
Strand 8	B	259	264	parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	46	52	first strand
Strand 2	C	55	61	anti-parallel
Strand 3	C	100	105	anti-parallel
Strand 4	C	66	74	parallel
Strand 5	C	139	144	parallel
Strand 6	C	168	172	parallel
Strand 7	C	231	236	parallel
Strand 8	C	259	264	parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	46	52	first strand
Strand 2	D	55	61	anti-parallel
Strand 3	D	100	105	anti-parallel
Strand 4	D	66	74	parallel
Strand 5	D	139	144	parallel
Strand 6	D	168	172	parallel
Strand 7	D	231	236	parallel
Strand 8	D	259	264	parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	46	52	first strand
Strand 2	E	55	61	anti-parallel
Strand 3	E	100	105	anti-parallel
Strand 4	E	66	74	parallel
Strand 5	E	139	144	parallel
Strand 6	E	168	172	parallel
Strand 7	E	231	236	parallel
Strand 8	E	259	264	parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	46	52	first strand
Strand 2	F	55	61	anti-parallel
Strand 3	F	100	105	anti-parallel
Strand 4	F	66	74	parallel
Strand 5	F	139	144	parallel
Strand 6	F	168	172	parallel
Strand 7	F	231	236	parallel
Strand 8	F	259	264	parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	46	52	first strand
Strand 2	G	55	61	anti-parallel
Strand 3	G	100	105	anti-parallel
Strand 4	G	66	74	parallel
Strand 5	G	139	144	parallel
Strand 6	G	168	172	parallel
Strand 7	G	231	236	parallel
Strand 8	G	259	264	parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	46	52	first strand
Strand 2	H	55	61	anti-parallel
Strand 3	H	100	105	anti-parallel
Strand 4	H	66	74	parallel
Strand 5	H	139	144	parallel
Strand 6	H	168	172	parallel
Strand 7	H	231	236	parallel
Strand 8	H	259	264	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4XVC

Analysis of interatomic Contacts of Structural Units in PDB entry:
4XVC