Analysis of interatomic Contacts of Structural Units in PDB entry:
4XVU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4XVU entry

There are 3 chains in PDB entry 4XVU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 4	ASP 352
B	THR 4	ASP 352
C	GLU 4	TYR 35

There are 89 helices in PDB entry 4XVU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	9	14	Right-handed alpha
Helix 2	AA2	A	30	46	Right-handed alpha
Helix 3	AA3	A	61	67	Right-handed alpha
Helix 4	AA4	A	89	103	Right-handed alpha
Helix 5	AA5	A	127	131	Right-handed alpha
Helix 6	AA6	A	135	154	Right-handed alpha
Helix 7	AA7	A	169	178	Right-handed alpha
Helix 8	AA8	A	178	190	Right-handed alpha
Helix 9	AA9	A	216	231	Right-handed alpha
Helix 10	AB1	A	245	262	Right-handed alpha
Helix 11	AB2	A	285	306	Right-handed alpha
Helix 12	AB3	A	322	332	Right-handed alpha
Helix 13	AB4	A	333	335	Right-handed 310
Helix 14	AB5	A	342	349	Right-handed 310
Helix 15	AB6	B	9	14	Right-handed alpha
Helix 16	AB7	B	30	46	Right-handed alpha
Helix 17	AB8	B	61	67	Right-handed alpha
Helix 18	AB9	B	89	100	Right-handed alpha
Helix 19	AC1	B	129	133	Right-handed 310
Helix 20	AC2	B	135	154	Right-handed alpha
Helix 21	AC3	B	169	178	Right-handed alpha
Helix 22	AC4	B	178	190	Right-handed alpha
Helix 23	AC5	B	212	231	Right-handed alpha
Helix 24	AC6	B	245	262	Right-handed alpha
Helix 25	AC7	B	285	306	Right-handed alpha
Helix 26	AC8	B	322	336	Right-handed alpha
Helix 27	AC9	C	31	35	Right-handed 310
Helix 28	AD1	C	56	59	Right-handed 310
Helix 29	AD2	C	90	94	Right-handed 310
Helix 30	AD3	C	165	167	Right-handed 310
Helix 31	AD4	C	196	198	Right-handed 310
Helix 32	AD5	C	210	213	Right-handed 310
Helix 33	AD6	D	80	84	Right-handed 310
Helix 34	AD7	D	124	131	Right-handed alpha
Helix 35	AD8	D	186	190	Right-handed alpha
Helix 36	AD9	E	31	33	Right-handed 310
Helix 37	AE1	E	56	59	Right-handed 310
Helix 38	AE2	E	77	79	Right-handed 310
Helix 39	AE3	E	165	167	Right-handed 310
Helix 40	AE4	E	196	198	Right-handed 310
Helix 41	AE5	E	210	213	Right-handed 310
Helix 42	AE6	F	80	84	Right-handed 310
Helix 43	AE7	F	124	130	Right-handed alpha
Helix 44	AE8	F	186	190	Right-handed alpha
Helix 45	AE9	G	9	14	Right-handed alpha
Helix 46	AF1	G	30	46	Right-handed alpha
Helix 47	AF2	G	61	67	Right-handed alpha
Helix 48	AF3	G	89	95	Right-handed alpha
Helix 49	AF4	G	129	133	Right-handed 310
Helix 50	AF5	G	135	155	Right-handed alpha
Helix 51	AF6	G	169	178	Right-handed alpha
Helix 52	AF7	G	178	196	Right-handed alpha
Helix 53	AF8	G	211	231	Right-handed alpha
Helix 54	AF9	G	245	262	Right-handed alpha
Helix 55	AG1	G	276	280	Right-handed 310
Helix 56	AG2	G	285	306	Right-handed alpha
Helix 57	AG3	G	323	336	Right-handed alpha
Helix 58	AG4	G	342	348	Right-handed 310
Helix 59	AG5	H	9	14	Right-handed alpha
Helix 60	AG6	H	30	46	Right-handed alpha
Helix 61	AG7	H	61	67	Right-handed alpha
Helix 62	AG8	H	89	99	Right-handed alpha
Helix 63	AG9	H	125	131	Right-handed alpha
Helix 64	AH1	H	135	154	Right-handed alpha
Helix 65	AH2	H	169	198	Right-handed alpha
Helix 66	AH3	H	213	231	Right-handed alpha
Helix 67	AH4	H	245	262	Right-handed alpha
Helix 68	AH5	H	276	280	Right-handed 310
Helix 69	AH6	H	285	306	Right-handed alpha
Helix 70	AH7	H	322	336	Right-handed alpha
Helix 71	AH8	H	343	349	Right-handed 310
Helix 72	AH9	I	31	35	Right-handed 310
Helix 73	AI1	I	56	59	Right-handed 310
Helix 74	AI2	I	90	94	Right-handed 310
Helix 75	AI3	I	165	167	Right-handed 310
Helix 76	AI4	I	210	213	Right-handed 310
Helix 77	AI5	J	80	84	Right-handed 310
Helix 78	AI6	J	124	131	Right-handed alpha
Helix 79	AI7	J	186	190	Right-handed alpha
Helix 80	AI8	K	31	33	Right-handed 310
Helix 81	AI9	K	90	94	Right-handed 310
Helix 82	AJ1	K	165	167	Right-handed 310
Helix 83	AJ2	K	196	198	Right-handed 310
Helix 84	AJ3	K	209	213	Right-handed 310
Helix 85	AJ4	L	80	84	Right-handed 310
Helix 86	AJ5	L	124	131	Right-handed alpha
Helix 87	AJ6	L	186	190	Right-handed alpha
Helix 88	AJ7	g	35	45	Right-handed alpha
Helix 89	AJ8	a	2	24	Right-handed alpha

There are 48 sheets in PDB entry 4XVU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	75	76	first strand
Strand 2	A	83	87	anti-parallel
Strand 3	A	51	55	parallel
Strand 4	A	162	166	parallel
Strand 5	A	20	25	parallel
Strand 6	A	236	243	parallel
Strand 7	A	268	274	parallel
Strand 8	A	310	315	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	75	76	first strand
Strand 2	B	83	87	anti-parallel
Strand 3	B	51	55	parallel
Strand 4	B	162	166	parallel
Strand 5	B	20	25	parallel
Strand 6	B	236	243	parallel
Strand 7	B	268	274	parallel
Strand 8	B	310	315	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	6	10	first strand
Strand 2	C	21	28	anti-parallel
Strand 3	C	81	86	anti-parallel
Strand 4	C	71	76	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	15	first strand
Strand 2	C	116	120	parallel
Strand 3	C	95	103	anti-parallel
Strand 4	C	36	42	anti-parallel
Strand 5	C	48	55	anti-parallel
Strand 6	C	60	63	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	15	first strand
Strand 2	C	116	120	parallel
Strand 3	C	95	103	anti-parallel
Strand 4	C	106	112	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	129	133	first strand
Strand 2	C	144	154	anti-parallel
Strand 3	C	185	194	anti-parallel
Strand 4	C	172	174	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	140	141	first strand
Strand 2	C	144	154	anti-parallel
Strand 3	C	185	194	anti-parallel
Strand 4	C	178	179	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	160	163	first strand
Strand 2	C	204	209	anti-parallel
Strand 3	C	214	219	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	5	8	first strand
Strand 2	D	20	26	anti-parallel
Strand 3	D	71	76	anti-parallel
Strand 4	D	63	68	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	14	first strand
Strand 2	D	105	109	parallel
Strand 3	D	86	91	anti-parallel
Strand 4	D	34	39	anti-parallel
Strand 5	D	46	50	anti-parallel
Strand 6	D	54	55	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	14	first strand
Strand 2	D	105	109	parallel
Strand 3	D	86	91	anti-parallel
Strand 4	D	100	101	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	117	121	first strand
Strand 2	D	132	142	anti-parallel
Strand 3	D	176	185	anti-parallel
Strand 4	D	162	166	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	156	157	first strand
Strand 2	D	148	153	anti-parallel
Strand 3	D	194	200	anti-parallel
Strand 4	D	208	213	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	6	10	first strand
Strand 2	E	21	28	anti-parallel
Strand 3	E	81	86	anti-parallel
Strand 4	E	71	76	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	14	15	first strand
Strand 2	E	116	120	parallel
Strand 3	E	95	103	anti-parallel
Strand 4	E	35	42	anti-parallel
Strand 5	E	48	55	anti-parallel
Strand 6	E	60	63	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	14	15	first strand
Strand 2	E	116	120	parallel
Strand 3	E	95	103	anti-parallel
Strand 4	E	106	112	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	129	133	first strand
Strand 2	E	144	154	anti-parallel
Strand 3	E	185	194	anti-parallel
Strand 4	E	172	174	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	129	133	first strand
Strand 2	E	144	154	anti-parallel
Strand 3	E	185	194	anti-parallel
Strand 4	E	178	179	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	160	163	first strand
Strand 2	E	204	209	anti-parallel
Strand 3	E	214	219	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	5	8	first strand
Strand 2	F	20	26	anti-parallel
Strand 3	F	71	76	anti-parallel
Strand 4	F	63	68	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	14	first strand
Strand 2	F	105	109	parallel
Strand 3	F	86	91	anti-parallel
Strand 4	F	34	39	anti-parallel
Strand 5	F	46	50	anti-parallel
Strand 6	F	54	55	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	14	first strand
Strand 2	F	105	109	parallel
Strand 3	F	86	91	anti-parallel
Strand 4	F	100	101	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	117	121	first strand
Strand 2	F	132	142	anti-parallel
Strand 3	F	176	185	anti-parallel
Strand 4	F	162	166	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	156	157	first strand
Strand 2	F	148	153	anti-parallel
Strand 3	F	194	200	anti-parallel
Strand 4	F	208	213	anti-parallel

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There are 8 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	75	76	first strand
Strand 2	G	83	87	anti-parallel
Strand 3	G	51	55	parallel
Strand 4	G	162	166	parallel
Strand 5	G	20	25	parallel
Strand 6	G	236	243	parallel
Strand 7	G	268	274	parallel
Strand 8	G	310	315	parallel

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There are 8 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	75	76	first strand
Strand 2	H	83	87	anti-parallel
Strand 3	H	51	55	parallel
Strand 4	H	162	166	parallel
Strand 5	H	20	25	parallel
Strand 6	H	236	243	parallel
Strand 7	H	268	274	parallel
Strand 8	H	310	315	parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	6	10	first strand
Strand 2	I	21	28	anti-parallel
Strand 3	I	81	86	anti-parallel
Strand 4	I	71	76	anti-parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	14	15	first strand
Strand 2	I	116	120	parallel
Strand 3	I	95	103	anti-parallel
Strand 4	I	36	42	anti-parallel
Strand 5	I	48	55	anti-parallel
Strand 6	I	60	63	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	14	15	first strand
Strand 2	I	116	120	parallel
Strand 3	I	95	103	anti-parallel
Strand 4	I	106	112	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	129	133	first strand
Strand 2	I	146	154	anti-parallel
Strand 3	I	185	192	anti-parallel
Strand 4	I	172	174	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	129	133	first strand
Strand 2	I	146	154	anti-parallel
Strand 3	I	185	192	anti-parallel
Strand 4	I	178	179	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	160	163	first strand
Strand 2	I	204	209	anti-parallel
Strand 3	I	214	219	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	6	8	first strand
Strand 2	J	20	25	anti-parallel
Strand 3	J	71	76	anti-parallel
Strand 4	J	63	68	anti-parallel

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There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	11	14	first strand
Strand 2	J	105	109	parallel
Strand 3	J	86	91	anti-parallel
Strand 4	J	34	39	anti-parallel
Strand 5	J	46	50	anti-parallel
Strand 6	J	54	55	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	11	14	first strand
Strand 2	J	105	109	parallel
Strand 3	J	86	91	anti-parallel
Strand 4	J	100	101	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	117	121	first strand
Strand 2	J	132	142	anti-parallel
Strand 3	J	176	185	anti-parallel
Strand 4	J	162	166	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	156	157	first strand
Strand 2	J	148	153	anti-parallel
Strand 3	J	194	200	anti-parallel
Strand 4	J	208	213	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	6	10	first strand
Strand 2	K	21	28	anti-parallel
Strand 3	K	81	86	anti-parallel
Strand 4	K	71	76	anti-parallel

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There are 6 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	13	15	first strand
Strand 2	K	116	120	parallel
Strand 3	K	95	103	anti-parallel
Strand 4	K	35	42	anti-parallel
Strand 5	K	48	54	anti-parallel
Strand 6	K	61	63	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	13	15	first strand
Strand 2	K	116	120	parallel
Strand 3	K	95	103	anti-parallel
Strand 4	K	106	112	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	129	133	first strand
Strand 2	K	144	154	anti-parallel
Strand 3	K	185	194	anti-parallel
Strand 4	K	172	174	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	129	133	first strand
Strand 2	K	144	154	anti-parallel
Strand 3	K	185	194	anti-parallel
Strand 4	K	178	179	anti-parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	160	163	first strand
Strand 2	K	204	208	anti-parallel
Strand 3	K	217	219	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	5	8	first strand
Strand 2	L	20	26	anti-parallel
Strand 3	L	71	76	anti-parallel
Strand 4	L	63	68	anti-parallel

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There are 6 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	11	14	first strand
Strand 2	L	105	109	parallel
Strand 3	L	86	91	anti-parallel
Strand 4	L	34	39	anti-parallel
Strand 5	L	46	50	anti-parallel
Strand 6	L	54	55	anti-parallel

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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	11	14	first strand
Strand 2	L	105	109	parallel
Strand 3	L	86	91	anti-parallel
Strand 4	L	100	101	anti-parallel

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There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	117	121	first strand
Strand 2	L	132	142	anti-parallel
Strand 3	L	176	185	anti-parallel
Strand 4	L	162	166	anti-parallel

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There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	156	157	first strand
Strand 2	L	148	153	anti-parallel
Strand 3	L	194	200	anti-parallel
Strand 4	L	208	213	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4XVU

Analysis of interatomic Contacts of Structural Units in PDB entry:
4XVU