Analysis of interatomic Contacts of Structural Units in PDB entry:
4XVX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4XVX entry

There are 2 chains in PDB entry 4XVX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 5VAL 381
B
 SER 5VAL 381
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 4XVX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 18Right-handed alpha
Helix 2
AA2
A
19 33Right-handed alpha
Helix 3
AA3
A
36 46Right-handed alpha
Helix 4
AA4
A
47 54Right-handed alpha
Helix 5
AA5
A
60 74Right-handed alpha
Helix 6
AA6
A
76 97Right-handed alpha
Helix 7
AA7
A
99 111Right-handed alpha
Helix 8
AA8
A
128 132Right-handed 310
Helix 9
AA9
A
225 263Right-handed alpha
Helix 10
AB1
A
273 300Right-handed alpha
Helix 11
AB2
A
304 330Right-handed alpha
Helix 12
AB3
A
330 335Right-handed alpha
Helix 13
AB4
A
341 350Right-handed alpha
Helix 14
AB5
A
351 354Right-handed 310
Helix 15
AB6
A
358 369Right-handed alpha
Helix 16
AB7
A
373 381Right-handed alpha
Helix 17
AB8
B
6 18Right-handed alpha
Helix 18
AB9
B
19 33Right-handed alpha
Helix 19
AC1
B
36 46Right-handed alpha
Helix 20
AC2
B
47 54Right-handed alpha
Helix 21
AC3
B
60 74Right-handed alpha
Helix 22
AC4
B
76 97Right-handed alpha
Helix 23
AC5
B
99 112Right-handed alpha
Helix 24
AC6
B
128 132Right-handed 310
Helix 25
AC7
B
225 263Right-handed alpha
Helix 26
AC8
B
273 300Right-handed alpha
Helix 27
AC9
B
304 330Right-handed alpha
Helix 28
AD1
B
330 335Right-handed alpha
Helix 29
AD2
B
341 350Right-handed alpha
Helix 30
AD3
B
351 354Right-handed 310
Helix 31
AD4
B
358 369Right-handed alpha
Helix 32
AD5
B
373 381Right-handed alpha
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There are 6 sheets in PDB entry 4XVX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 119first strand
Strand 2
A
160 167parallel
Strand 3
A
135 139parallel
Strand 4
A
142 153anti-parallel
Strand 5
A
205 215anti-parallel
Strand 6
A
189 191anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 119first strand
Strand 2
A
160 167parallel
Strand 3
A
179 185anti-parallel
Strand 4
A
219 221anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 265first strand
Strand 2
A
268 269anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
116 119first strand
Strand 2
B
160 167parallel
Strand 3
B
135 139parallel
Strand 4
B
142 153anti-parallel
Strand 5
B
205 215anti-parallel
Strand 6
B
189 191anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
116 119first strand
Strand 2
B
160 167parallel
Strand 3
B
179 185anti-parallel
Strand 4
B
219 221anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
264 265first strand
Strand 2
B
268 269anti-parallel
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