Analysis of interatomic Contacts of Structural Units in PDB entry:
4Y0B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Y0B entry

There are 2 chains in PDB entry 4Y0B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 84GLU 227
B
 PRO 84GLU 227
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 4Y0B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
87 104Right-handed alpha
Helix 2
AA2
A
110 122Right-handed alpha
Helix 3
AA3
A
124 133Right-handed alpha
Helix 4
AA4
A
136 146Right-handed alpha
Helix 5
AA5
A
164 179Right-handed alpha
Helix 6
AA6
A
188 198Right-handed alpha
Helix 7
AA7
A
202 211Right-handed alpha
Helix 8
AA8
A
214 225Right-handed alpha
Helix 9
AA9
B
87 104Right-handed alpha
Helix 10
AB1
B
110 122Right-handed alpha
Helix 11
AB2
B
124 133Right-handed alpha
Helix 12
AB3
B
136 146Right-handed alpha
Helix 13
AB4
B
164 180Right-handed alpha
Helix 14
AB5
B
188 198Right-handed alpha
Helix 15
AB6
B
202 211Right-handed alpha
Helix 16
AB7
B
214 225Right-handed alpha
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There are no sheets in PDB entry 4Y0B
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il