Analysis of interatomic Contacts of Structural Units in PDB entry:
4YC7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4YC7 entry

There are 2 chains in PDB entry 4YC7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLU 32ASP 377
A
 ALA -1GLU 177
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 4YC7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
39 43Right-handed 310
Helix 2
AA2
B
45 54Right-handed alpha
Helix 3
AA3
B
56 70Right-handed alpha
Helix 4
AA4
B
75 88Right-handed alpha
Helix 5
AA5
B
92 100Right-handed alpha
Helix 6
AA6
B
102 117Right-handed alpha
Helix 7
AA7
B
118 127Right-handed alpha
Helix 8
AA8
B
131 146Right-handed alpha
Helix 9
AA9
B
206 217Right-handed alpha
Helix 10
AB1
B
219 233Right-handed alpha
Helix 11
AB2
B
234 244Right-handed alpha
Helix 12
AB3
B
246 254Right-handed alpha
Helix 13
AB4
B
255 257Right-handed 310
Helix 14
AB5
B
259 276Right-handed alpha
Helix 15
AB6
B
278 295Right-handed alpha
Helix 16
AB7
B
300 310Right-handed alpha
Helix 17
AB8
B
313 330Right-handed alpha
Helix 18
AB9
B
333 347Right-handed alpha
Helix 19
AC1
B
348 357Right-handed alpha
Helix 20
AC2
B
361 375Right-handed alpha
Helix 21
AC3
A
14 25Right-handed alpha
Helix 22
AC4
A
60 64Right-handed 310
Helix 23
AC5
A
66 71Right-handed 310
Helix 24
AC6
A
85 95Right-handed alpha
Helix 25
AC7
A
95 104Right-handed alpha
Helix 26
AC8
A
115 120Right-handed 310
Helix 27
AC9
A
121 131Right-handed alpha
Helix 28
AD1
A
137 148Right-handed alpha
Helix 29
AD2
A
163 177Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 4YC7.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 45first strand
Strand 2
A
48 57anti-parallel
Strand 3
A
1 9parallel
Strand 4
A
76 82parallel
Strand 5
A
109 114parallel
Strand 6
A
153 155parallel
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