Analysis of interatomic Contacts of Structural Units in PDB entry:
4YE8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4YE8 entry

There is 1 chain in PDB entry 4YE8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0ASP 771
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 4YE8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 12Right-handed alpha
Helix 2
AA2
A
16 26Right-handed alpha
Helix 3
AA3
A
28 39Right-handed alpha
Helix 4
AA4
A
49 63Right-handed alpha
Helix 5
AA5
A
65 67Right-handed 310
Helix 6
AA6
A
68 78Right-handed alpha
Helix 7
AA7
A
83 96Right-handed alpha
Helix 8
AA8
A
103 110Right-handed alpha
Helix 9
AA9
A
118 132Right-handed alpha
Helix 10
AB1
A
133 141Right-handed alpha
Helix 11
AB2
A
142 144Right-handed 310
Helix 12
AB3
A
145 155Right-handed alpha
Helix 13
AB4
A
161 178Right-handed alpha
Helix 14
AB5
A
225 229Right-handed 310
Helix 15
AB6
A
236 240Right-handed 310
Helix 16
AB7
A
248 261Right-handed alpha
Helix 17
AB8
A
279 293Right-handed alpha
Helix 18
AB9
A
311 325Right-handed alpha
Helix 19
AC1
A
338 352Right-handed alpha
Helix 20
AC2
A
379 392Right-handed alpha
Helix 21
AC3
A
437 449Right-handed alpha
Helix 22
AC4
A
466 474Right-handed alpha
Helix 23
AC5
A
495 500Right-handed alpha
Helix 24
AC6
A
518 525Right-handed alpha
Helix 25
AC7
A
528 539Right-handed alpha
Helix 26
AC8
A
550 565Right-handed alpha
Helix 27
AC9
A
730 733Right-handed 310
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There are 9 sheets in PDB entry 4YE8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 268first strand
Strand 2
A
297 302parallel
Strand 3
A
332 334parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
355 358first strand
Strand 2
A
401 404anti-parallel
Strand 3
A
416 420anti-parallel
Strand 4
A
434 436anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
453 455first strand
Strand 2
A
480 482parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
488 489first strand
Strand 2
A
547 548parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
567 568first strand
Strand 2
A
742 743parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
570 571first strand
Strand 2
A
726 728anti-parallel
Strand 3
A
685 692anti-parallel
Strand 4
A
720 722anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
570 571first strand
Strand 2
A
726 728anti-parallel
Strand 3
A
685 692anti-parallel
Strand 4
A
761 766parallel
Strand 5
A
748 751anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
574 576first strand
Strand 2
A
613 615anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
578 579first strand
Strand 2
A
661 663parallel
Strand 3
A
647 650anti-parallel
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