Analysis of interatomic Contacts of Structural Units in PDB entry:
4YI7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4YI7 entry

There is 1 chain in PDB entry 4YI7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 0GLU 345
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 4YI7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
0 12Right-handed alpha
Helix 2
AA2
A
17 30Right-handed alpha
Helix 3
AA3
A
34 49Right-handed alpha
Helix 4
AA4
A
51 65Right-handed alpha
Helix 5
AA5
A
92 104Right-handed alpha
Helix 6
AA6
A
123 129Right-handed alpha
Helix 7
AA7
A
136 148Right-handed alpha
Helix 8
AA8
A
164 172Right-handed alpha
Helix 9
AA9
A
175 181Right-handed alpha
Helix 10
AB1
A
182 185Right-handed 310
Helix 11
AB2
A
198 200Right-handed 310
Helix 12
AB3
A
201 212Right-handed alpha
Helix 13
AB4
A
251 256Right-handed 310
Helix 14
AB5
A
269 282Right-handed alpha
Helix 15
AB6
A
286 307Right-handed alpha
Helix 16
AB7
A
312 327Right-handed alpha
Helix 17
AB8
A
327 344Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 4YI7.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 152first strand
Strand 2
A
107 111parallel
Strand 3
A
77 82parallel
Strand 4
A
191 195parallel
Strand 5
A
216 222parallel
Strand 6
A
235 241anti-parallel
Strand 7
A
244 250anti-parallel
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