Analysis of interatomic Contacts of Structural Units in PDB entry:
4YKC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4YKC entry

There is 1 chain in PDB entry 4YKC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE -1GLY 436
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 9 helices in PDB entry 4YKC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
294 310Right-handed alpha
Helix 2
AA2
A
311 327Right-handed alpha
Helix 3
AA3
A
330 343Right-handed alpha
Helix 4
AA4
A
346 348Right-handed 310
Helix 5
AA5
A
349 354Right-handed alpha
Helix 6
AA6
A
355 357Right-handed 310
Helix 7
AA7
A
358 360Right-handed 310
Helix 8
AA8
A
361 372Right-handed alpha
Helix 9
AA9
A
422 436Right-handed alpha
Back to top of page
There are no sheets in PDB entry 4YKC
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il