Analysis of interatomic Contacts of Structural Units in PDB entry:
4YN8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4YN8 entry

There is 1 chain in PDB entry 4YN8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU -1ILE 199
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 4YN8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 23Right-handed alpha
Helix 2
AA2
A
57 69Right-handed alpha
Helix 3
AA3
A
84 91Right-handed alpha
Helix 4
AA4
A
102 116Right-handed alpha
Helix 5
AA5
A
121 133Right-handed alpha
Helix 6
AA6
A
140 152Right-handed alpha
Helix 7
AA7
A
155 164Right-handed alpha
Helix 8
AA8
A
166 182Right-handed alpha
Helix 9
AA9
A
185 196Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 4YN8.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 33first strand
Strand 2
A
2 7parallel
Strand 3
A
46 49parallel
Strand 4
A
73 77parallel
Strand 5
A
95 98parallel
Strand 6
A
119 120parallel
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