Analysis of interatomic Contacts of Structural Units in PDB entry:
4YS0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4YS0 entry

There is 1 chain in PDB entry 4YS0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 2HIS 819
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 4YS0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 31Right-handed alpha
Helix 2
AA2
A
32 47Right-handed alpha
Helix 3
AA3
A
49 56Right-handed alpha
Helix 4
AA4
A
56 73Right-handed alpha
Helix 5
AA5
A
77 89Right-handed alpha
Helix 6
AA6
A
100 105Right-handed alpha
Helix 7
AA7
A
105 114Right-handed alpha
Helix 8
AA8
A
125 143Right-handed alpha
Helix 9
AA9
A
163 173Right-handed alpha
Helix 10
AB1
A
188 192Right-handed 310
Helix 11
AB2
A
193 200Right-handed alpha
Helix 12
AB3
A
208 215Right-handed alpha
Helix 13
AB4
A
222 233Right-handed alpha
Helix 14
AB5
A
237 241Right-handed 310
Helix 15
AB6
A
253 259Right-handed alpha
Helix 16
AB7
A
260 264Right-handed 310
Helix 17
AB8
A
275 287Right-handed alpha
Helix 18
AB9
A
307 319Right-handed alpha
Helix 19
AC1
A
325 327Right-handed 310
Helix 20
AC2
A
328 344Right-handed alpha
Helix 21
AC3
A
377 386Right-handed alpha
Helix 22
AC4
A
401 407Right-handed alpha
Helix 23
AC5
A
419 421Right-handed 310
Helix 24
AC6
A
422 431Right-handed alpha
Helix 25
AC7
A
455 474Right-handed alpha
Helix 26
AC8
A
483 498Right-handed alpha
Helix 27
AC9
A
508 517Right-handed alpha
Helix 28
AD1
A
544 548Right-handed 310
Helix 29
AD2
A
560 569Right-handed alpha
Helix 30
AD3
A
570 571Right-handed 310
Helix 31
AD4
A
572 576Right-handed 310
Helix 32
AD5
A
588 594Right-handed alpha
Helix 33
AD6
A
595 606Right-handed alpha
Helix 34
AD7
A
616 665Right-handed alpha
Helix 35
AD8
A
668 689Right-handed alpha
Helix 36
AD9
A
694 702Right-handed alpha
Helix 37
AE1
A
719 743Right-handed alpha
Helix 38
AE2
A
745 779Right-handed alpha
Helix 39
AE3
A
786 816Right-handed alpha
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There are 6 sheets in PDB entry 4YS0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 206first strand
Strand 2
A
156 161anti-parallel
Strand 3
A
147 150anti-parallel
Strand 4
A
217 221parallel
Strand 5
A
120 123parallel
Strand 6
A
248 252parallel
Strand 7
A
411 416parallel
Strand 8
A
92 94parallel
Strand 9
A
434 436parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 271first strand
Strand 2
A
394 400anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
295 298first strand
Strand 2
A
303 306anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
351 354first strand
Strand 2
A
357 361anti-parallel
Strand 3
A
368 369anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
446 447first strand
Strand 2
A
578 585parallel
Strand 3
A
451 453parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
446 447first strand
Strand 2
A
578 585parallel
Strand 3
A
550 554parallel
Strand 4
A
477 481parallel
Strand 5
A
525 529parallel
Strand 6
A
502 504parallel
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