Analysis of interatomic Contacts of Structural Units in PDB entry:
4YTE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4YTE entry

There is 1 chain in PDB entry 4YTE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 194
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 4YTE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 17Right-handed alpha
Helix 2
AA2
A
19 24Right-handed alpha
Helix 3
AA3
A
30 42Right-handed alpha
Helix 4
AA4
A
52 56Right-handed 310
Helix 5
AA5
A
57 67Right-handed alpha
Helix 6
AA6
A
74 80Right-handed alpha
Helix 7
AA7
A
94 103Right-handed alpha
Helix 8
AA8
A
119 126Right-handed alpha
Helix 9
AA9
A
127 134Right-handed alpha
Helix 10
AB1
A
171 185Right-handed alpha
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There are 2 sheets in PDB entry 4YTE. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 72first strand
Strand 2
A
45 49parallel
Strand 3
A
2 6parallel
Strand 4
A
84 87parallel
Strand 5
A
111 114parallel
Strand 6
A
139 142parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 145first strand
Strand 2
A
156 161anti-parallel
Strand 3
A
188 193parallel
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