Analysis of interatomic Contacts of Structural Units in PDB entry:
4YV4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4YV4 entry

There are 8 chains in PDB entry 4YV4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 129PHE 175
B
 ALA 129THR 179
C
 GLY 123THR 179
D
 PRO 124THR 179
E
 GLU 127THR 179
F
 GLU 127GLN 176
G
 PRO 124THR 179
H
 GLY 123THR 179
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 4YV4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
129 173Right-handed alpha
Helix 2
AA2
B
130 179Right-handed alpha
Helix 3
AA3
C
124 178Right-handed alpha
Helix 4
AA4
D
125 179Right-handed alpha
Helix 5
AA5
E
128 178Right-handed alpha
Helix 6
AA6
F
128 176Right-handed alpha
Helix 7
AA7
G
125 179Right-handed alpha
Helix 8
AA8
H
125 178Right-handed alpha
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There are no sheets in PDB entry 4YV4
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il