Analysis of interatomic Contacts of Structural Units in PDB entry:
4YV7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4YV7 entry

There is 1 chain in PDB entry 4YV7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 39GLU 326
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4YV7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
52 69Right-handed alpha
Helix 2
AA2
A
81 95Right-handed alpha
Helix 3
AA3
A
110 120Right-handed alpha
Helix 4
AA4
A
142 159Right-handed alpha
Helix 5
AA5
A
160 162Right-handed 310
Helix 6
AA6
A
174 189Right-handed alpha
Helix 7
AA7
A
205 220Right-handed alpha
Helix 8
AA8
A
230 244Right-handed alpha
Helix 9
AA9
A
257 267Right-handed alpha
Helix 10
AB1
A
277 294Right-handed alpha
Helix 11
AB2
A
310 315Right-handed alpha
Helix 12
AB3
A
316 318Right-handed 310
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There are 2 sheets in PDB entry 4YV7. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 77first strand
Strand 2
A
42 47parallel
Strand 3
A
99 102parallel
Strand 4
A
123 127parallel
Strand 5
A
137 140parallel
Strand 6
A
301 303parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 201first strand
Strand 2
A
163 169parallel
Strand 3
A
223 228parallel
Strand 4
A
250 252parallel
Strand 5
A
270 274parallel
Strand 6
A
308 309anti-parallel
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