Analysis of interatomic Contacts of Structural Units in PDB entry:
4YZE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4YZE entry

There are 4 chains in PDB entry 4YZE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 7VAL 199
B
 ASP 8VAL 199
C
 ASP 8ALA 198
D
 HIS 7PRO 197
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 4YZE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 25Right-handed alpha
Helix 2
AA2
A
30 39Right-handed alpha
Helix 3
AA3
A
41 49Right-handed alpha
Helix 4
AA4
A
51 78Right-handed alpha
Helix 5
AA5
A
81 96Right-handed alpha
Helix 6
AA6
A
106 113Right-handed alpha
Helix 7
AA7
A
114 118Right-handed 310
Helix 8
AA8
A
119 147Right-handed alpha
Helix 9
AA9
A
155 178Right-handed alpha
Helix 10
AB1
A
180 194Right-handed alpha
Helix 11
AB2
B
9 25Right-handed alpha
Helix 12
AB3
B
30 39Right-handed alpha
Helix 13
AB4
B
41 49Right-handed alpha
Helix 14
AB5
B
51 77Right-handed alpha
Helix 15
AB6
B
81 96Right-handed alpha
Helix 16
AB7
B
106 113Right-handed alpha
Helix 17
AB8
B
119 147Right-handed alpha
Helix 18
AB9
B
155 178Right-handed alpha
Helix 19
AC1
B
180 194Right-handed alpha
Helix 20
AC2
C
9 25Right-handed alpha
Helix 21
AC3
C
30 39Right-handed alpha
Helix 22
AC4
C
41 49Right-handed alpha
Helix 23
AC5
C
51 77Right-handed alpha
Helix 24
AC6
C
81 97Right-handed alpha
Helix 25
AC7
C
105 113Right-handed alpha
Helix 26
AC8
C
114 118Right-handed 310
Helix 27
AC9
C
119 147Right-handed alpha
Helix 28
AD1
C
155 178Right-handed alpha
Helix 29
AD2
C
180 194Right-handed alpha
Helix 30
AD3
D
9 25Right-handed alpha
Helix 31
AD4
D
30 38Right-handed alpha
Helix 32
AD5
D
44 49Right-handed alpha
Helix 33
AD6
D
51 76Right-handed alpha
Helix 34
AD7
D
82 96Right-handed alpha
Helix 35
AD8
D
106 113Right-handed alpha
Helix 36
AD9
D
119 147Right-handed alpha
Helix 37
AE1
D
155 178Right-handed alpha
Helix 38
AE2
D
180 194Right-handed alpha
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There are 2 sheets in PDB entry 4YZE. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 99first strand
Strand 2
A
102 103anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
98 99first strand
Strand 2
D
102 103anti-parallel
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