Analysis of interatomic Contacts of Structural Units in PDB entry:
4Z0M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Z0M entry

There are 3 chains in PDB entry 4Z0M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3PHE 243
B
 ASP 3ARG 241
C
 ASP 3VAL 232
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 4Z0M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 24Right-handed 310
Helix 2
AA2
A
28 45Right-handed alpha
Helix 3
AA3
A
65 69Right-handed 310
Helix 4
AA4
A
86 90Right-handed 310
Helix 5
AA5
A
106 115Right-handed alpha
Helix 6
AA6
A
129 134Right-handed alpha
Helix 7
AA7
A
140 150Right-handed alpha
Helix 8
AA8
A
150 161Right-handed alpha
Helix 9
AA9
A
166 172Right-handed alpha
Helix 10
AB1
A
183 197Right-handed alpha
Helix 11
AB2
A
199 213Right-handed alpha
Helix 12
AB3
A
217 232Right-handed alpha
Helix 13
AB4
A
232 242Right-handed alpha
Helix 14
AB5
B
20 24Right-handed 310
Helix 15
AB6
B
28 45Right-handed alpha
Helix 16
AB7
B
65 69Right-handed 310
Helix 17
AB8
B
106 115Right-handed alpha
Helix 18
AB9
B
129 134Right-handed alpha
Helix 19
AC1
B
140 150Right-handed alpha
Helix 20
AC2
B
150 161Right-handed alpha
Helix 21
AC3
B
166 172Right-handed alpha
Helix 22
AC4
B
183 197Right-handed alpha
Helix 23
AC5
B
199 213Right-handed alpha
Helix 24
AC6
B
217 232Right-handed alpha
Helix 25
AC7
B
232 240Right-handed alpha
Helix 26
AC8
C
20 24Right-handed 310
Helix 27
AC9
C
28 45Right-handed alpha
Helix 28
AD1
C
65 69Right-handed 310
Helix 29
AD2
C
106 115Right-handed alpha
Helix 30
AD3
C
129 134Right-handed alpha
Helix 31
AD4
C
140 150Right-handed alpha
Helix 32
AD5
C
150 161Right-handed alpha
Helix 33
AD6
C
166 172Right-handed alpha
Helix 34
AD7
C
183 197Right-handed alpha
Helix 35
AD8
C
199 213Right-handed alpha
Helix 36
AD9
C
217 232Right-handed alpha
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There are 6 sheets in PDB entry 4Z0M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 10first strand
Strand 2
A
13 18anti-parallel
Strand 3
A
50 55parallel
Strand 4
A
96 100parallel
Strand 5
A
117 121parallel
Strand 6
A
177 179parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 105first strand
Strand 2
A
125 127parallel
Strand 3
A
163 165anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 10first strand
Strand 2
B
13 18anti-parallel
Strand 3
B
50 55parallel
Strand 4
B
96 100parallel
Strand 5
B
117 121parallel
Strand 6
B
177 179parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 105first strand
Strand 2
B
125 127parallel
Strand 3
B
164 165anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
5 10first strand
Strand 2
C
13 18anti-parallel
Strand 3
C
50 55parallel
Strand 4
C
96 100parallel
Strand 5
C
117 121parallel
Strand 6
C
177 179parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
103 105first strand
Strand 2
C
125 127parallel
Strand 3
C
164 165anti-parallel
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