Analysis of interatomic Contacts of Structural Units in PDB entry:
4Z0N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Z0N entry

There is 1 chain in PDB entry 4Z0N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 26LYS 332
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 4Z0N. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
38 56Right-handed alpha
Helix 2
AA2
A
69 83Right-handed alpha
Helix 3
AA3
A
97 109Right-handed alpha
Helix 4
AA4
A
120 125Right-handed alpha
Helix 5
AA5
A
136 155Right-handed alpha
Helix 6
AA6
A
156 159Right-handed 310
Helix 7
AA7
A
177 194Right-handed alpha
Helix 8
AA8
A
209 223Right-handed alpha
Helix 9
AA9
A
225 229Right-handed 310
Helix 10
AB1
A
236 250Right-handed alpha
Helix 11
AB2
A
262 271Right-handed alpha
Helix 12
AB3
A
281 298Right-handed alpha
Helix 13
AB4
A
326 331Right-handed 310
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There are 3 sheets in PDB entry 4Z0N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
59 65first strand
Strand 2
A
27 33parallel
Strand 3
A
87 90parallel
Strand 4
A
112 115parallel
Strand 5
A
130 134parallel
Strand 6
A
314 316parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
198 205first strand
Strand 2
A
166 172parallel
Strand 3
A
231 234parallel
Strand 4
A
256 257parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
276 279first strand
Strand 2
A
320 323anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il