Analysis of interatomic Contacts of Structural Units in PDB entry:
4Z0P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Z0P entry

There is 1 chain in PDB entry 4Z0P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 4TYR 319
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 4Z0P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 23Right-handed alpha
Helix 2
AA2
A
36 40Right-handed 310
Helix 3
AA3
A
58 63Right-handed alpha
Helix 4
AA4
A
78 82Right-handed 310
Helix 5
AA5
A
95 115Right-handed alpha
Helix 6
AA6
A
116 126Right-handed alpha
Helix 7
AA7
A
136 139Right-handed 310
Helix 8
AA8
A
148 161Right-handed alpha
Helix 9
AA9
A
182 184Right-handed 310
Helix 10
AB1
A
185 193Right-handed alpha
Helix 11
AB2
A
203 207Right-handed 310
Helix 12
AB3
A
211 216Right-handed alpha
Helix 13
AB4
A
234 238Right-handed 310
Helix 14
AB5
A
239 250Right-handed alpha
Helix 15
AB6
A
269 274Right-handed 310
Helix 16
AB7
A
288 305Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 4Z0P. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 33first strand
Strand 2
A
7 11parallel
Strand 3
A
49 53parallel
Strand 4
A
68 71parallel
Strand 5
A
90 91parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 181first strand
Strand 2
A
164 168parallel
Strand 3
A
141 145parallel
Strand 4
A
195 198parallel
Strand 5
A
228 231parallel
Strand 6
A
254 257parallel
Strand 7
A
277 279parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il