Analysis of interatomic Contacts of Structural Units in PDB entry:
4Z0Y

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4Z0Y entry

There are 5 chains in PDB entry 4Z0Y (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 1	SER 251
A	THR 253	ASN 347
E	VAL 440	PRO 447
B	ALA 1	SER 251
B	THR 253	GLY 303

There are 63 helices in PDB entry 4Z0Y. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	61	78	Right-handed alpha
Helix 2	AA2	A	85	98	Right-handed alpha
Helix 3	AA3	A	104	107	Right-handed 310
Helix 4	AA4	A	120	140	Right-handed alpha
Helix 5	AA5	A	154	158	Right-handed 310
Helix 6	AA6	A	161	165	Right-handed 310
Helix 7	AA7	A	178	185	Right-handed alpha
Helix 8	AA8	A	199	216	Right-handed alpha
Helix 9	AA9	A	221	227	Right-handed alpha
Helix 10	AB1	A	245	250	Right-handed alpha
Helix 11	AB2	A	250	260	Right-handed alpha
Helix 12	AB3	A	272	277	Right-handed alpha
Helix 13	AB4	A	279	299	Right-handed alpha
Helix 14	AB5	A	309	314	Right-handed alpha
Helix 15	AB6	A	332	335	Right-handed 310
Helix 16	AB7	A	336	341	Right-handed alpha
Helix 17	AB8	B	61	78	Right-handed alpha
Helix 18	AB9	B	85	98	Right-handed alpha
Helix 19	AC1	B	104	107	Right-handed 310
Helix 20	AC2	B	120	140	Right-handed alpha
Helix 21	AC3	B	154	158	Right-handed 310
Helix 22	AC4	B	161	165	Right-handed 310
Helix 23	AC5	B	178	185	Right-handed alpha
Helix 24	AC6	B	199	216	Right-handed alpha
Helix 25	AC7	B	221	227	Right-handed alpha
Helix 26	AC8	B	245	250	Right-handed alpha
Helix 27	AC9	B	250	260	Right-handed alpha
Helix 28	AD1	B	272	277	Right-handed alpha
Helix 29	AD2	B	279	299	Right-handed alpha
Helix 30	AD3	B	309	314	Right-handed alpha
Helix 31	AD4	B	332	335	Right-handed 310
Helix 32	AD5	B	337	340	Right-handed 310
Helix 33	AD6	C	61	78	Right-handed alpha
Helix 34	AD7	C	85	98	Right-handed alpha
Helix 35	AD8	C	104	107	Right-handed 310
Helix 36	AD9	C	120	140	Right-handed alpha
Helix 37	AE1	C	154	158	Right-handed 310
Helix 38	AE2	C	161	165	Right-handed 310
Helix 39	AE3	C	178	185	Right-handed alpha
Helix 40	AE4	C	199	216	Right-handed alpha
Helix 41	AE5	C	221	227	Right-handed alpha
Helix 42	AE6	C	245	250	Right-handed alpha
Helix 43	AE7	C	250	260	Right-handed alpha
Helix 44	AE8	C	272	277	Right-handed alpha
Helix 45	AE9	C	280	299	Right-handed alpha
Helix 46	AF1	C	309	314	Right-handed alpha
Helix 47	AF2	C	332	335	Right-handed 310
Helix 48	AF3	C	336	341	Right-handed alpha
Helix 49	AF4	D	61	78	Right-handed alpha
Helix 50	AF5	D	85	98	Right-handed alpha
Helix 51	AF6	D	104	107	Right-handed 310
Helix 52	AF7	D	120	140	Right-handed alpha
Helix 53	AF8	D	154	158	Right-handed 310
Helix 54	AF9	D	161	165	Right-handed 310
Helix 55	AG1	D	178	185	Right-handed alpha
Helix 56	AG2	D	199	216	Right-handed alpha
Helix 57	AG3	D	221	227	Right-handed alpha
Helix 58	AG4	D	245	250	Right-handed alpha
Helix 59	AG5	D	250	260	Right-handed alpha
Helix 60	AG6	D	272	277	Right-handed alpha
Helix 61	AG7	D	280	299	Right-handed alpha
Helix 62	AG8	D	309	314	Right-handed alpha
Helix 63	AG9	D	332	335	Right-handed 310

There are 12 sheets in PDB entry 4Z0Y. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	40	42	first strand
Strand 2	A	326	330	parallel
Strand 3	A	316	320	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	148	149	first strand
Strand 2	A	52	56	parallel
Strand 3	A	342	344	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	102	103	first strand
Strand 2	A	108	112	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	42	first strand
Strand 2	B	326	330	parallel
Strand 3	B	316	320	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	148	149	first strand
Strand 2	B	52	56	parallel
Strand 3	B	342	344	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	102	103	first strand
Strand 2	B	108	112	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	40	42	first strand
Strand 2	C	326	330	parallel
Strand 3	C	316	320	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	148	149	first strand
Strand 2	C	52	56	parallel
Strand 3	C	342	344	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	102	103	first strand
Strand 2	C	108	112	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	40	42	first strand
Strand 2	D	326	330	parallel
Strand 3	D	316	320	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	148	149	first strand
Strand 2	D	52	56	parallel
Strand 3	D	342	344	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	102	103	first strand
Strand 2	D	108	112	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4Z0Y

Analysis of interatomic Contacts of Structural Units in PDB entry:
4Z0Y