Analysis of interatomic Contacts of Structural Units in PDB entry:
4Z10

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4Z10 entry

There are 5 chains in PDB entry 4Z10 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 1	SER 251
A	THR 253	ASN 347
G	ASP 438	TYR 449
B	ALA 1	SER 251
B	THR 253	LEU 301

There are 96 helices in PDB entry 4Z10. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	61	78	Right-handed alpha
Helix 2	AA2	A	85	98	Right-handed alpha
Helix 3	AA3	A	104	107	Right-handed 310
Helix 4	AA4	A	120	140	Right-handed alpha
Helix 5	AA5	A	154	158	Right-handed 310
Helix 6	AA6	A	161	165	Right-handed 310
Helix 7	AA7	A	178	185	Right-handed alpha
Helix 8	AA8	A	199	216	Right-handed alpha
Helix 9	AA9	A	221	227	Right-handed alpha
Helix 10	AB1	A	245	250	Right-handed alpha
Helix 11	AB2	A	250	260	Right-handed alpha
Helix 12	AB3	A	272	277	Right-handed alpha
Helix 13	AB4	A	280	299	Right-handed alpha
Helix 14	AB5	A	309	314	Right-handed alpha
Helix 15	AB6	A	332	335	Right-handed 310
Helix 16	AB7	A	336	341	Right-handed alpha
Helix 17	AB8	B	61	78	Right-handed alpha
Helix 18	AB9	B	85	98	Right-handed alpha
Helix 19	AC1	B	104	107	Right-handed 310
Helix 20	AC2	B	120	140	Right-handed alpha
Helix 21	AC3	B	154	158	Right-handed 310
Helix 22	AC4	B	161	165	Right-handed 310
Helix 23	AC5	B	178	185	Right-handed alpha
Helix 24	AC6	B	199	216	Right-handed alpha
Helix 25	AC7	B	221	227	Right-handed alpha
Helix 26	AC8	B	245	250	Right-handed alpha
Helix 27	AC9	B	250	260	Right-handed alpha
Helix 28	AD1	B	272	277	Right-handed alpha
Helix 29	AD2	B	280	299	Right-handed alpha
Helix 30	AD3	B	309	314	Right-handed alpha
Helix 31	AD4	B	332	335	Right-handed 310
Helix 32	AD5	B	336	341	Right-handed alpha
Helix 33	AD6	C	61	78	Right-handed alpha
Helix 34	AD7	C	85	98	Right-handed alpha
Helix 35	AD8	C	104	107	Right-handed 310
Helix 36	AD9	C	120	140	Right-handed alpha
Helix 37	AE1	C	154	158	Right-handed 310
Helix 38	AE2	C	161	165	Right-handed 310
Helix 39	AE3	C	178	185	Right-handed alpha
Helix 40	AE4	C	199	216	Right-handed alpha
Helix 41	AE5	C	221	227	Right-handed alpha
Helix 42	AE6	C	245	250	Right-handed alpha
Helix 43	AE7	C	250	260	Right-handed alpha
Helix 44	AE8	C	272	277	Right-handed alpha
Helix 45	AE9	C	280	299	Right-handed alpha
Helix 46	AF1	C	309	314	Right-handed alpha
Helix 47	AF2	C	332	335	Right-handed 310
Helix 48	AF3	C	336	341	Right-handed alpha
Helix 49	AF4	D	61	78	Right-handed alpha
Helix 50	AF5	D	85	98	Right-handed alpha
Helix 51	AF6	D	104	107	Right-handed 310
Helix 52	AF7	D	120	140	Right-handed alpha
Helix 53	AF8	D	154	158	Right-handed 310
Helix 54	AF9	D	161	165	Right-handed 310
Helix 55	AG1	D	178	185	Right-handed alpha
Helix 56	AG2	D	199	216	Right-handed alpha
Helix 57	AG3	D	221	227	Right-handed alpha
Helix 58	AG4	D	245	250	Right-handed alpha
Helix 59	AG5	D	250	260	Right-handed alpha
Helix 60	AG6	D	272	277	Right-handed alpha
Helix 61	AG7	D	280	299	Right-handed alpha
Helix 62	AG8	D	309	314	Right-handed alpha
Helix 63	AG9	D	332	335	Right-handed 310
Helix 64	AH1	D	336	341	Right-handed alpha
Helix 65	AH2	E	61	78	Right-handed alpha
Helix 66	AH3	E	85	98	Right-handed alpha
Helix 67	AH4	E	104	107	Right-handed 310
Helix 68	AH5	E	120	140	Right-handed alpha
Helix 69	AH6	E	154	158	Right-handed 310
Helix 70	AH7	E	161	165	Right-handed 310
Helix 71	AH8	E	178	185	Right-handed alpha
Helix 72	AH9	E	199	216	Right-handed alpha
Helix 73	AI1	E	221	227	Right-handed alpha
Helix 74	AI2	E	245	250	Right-handed alpha
Helix 75	AI3	E	250	260	Right-handed alpha
Helix 76	AI4	E	272	277	Right-handed alpha
Helix 77	AI5	E	280	299	Right-handed alpha
Helix 78	AI6	E	309	314	Right-handed alpha
Helix 79	AI7	E	332	335	Right-handed 310
Helix 80	AI8	F	58	60	Right-handed 310
Helix 81	AI9	F	61	78	Right-handed alpha
Helix 82	AJ1	F	85	98	Right-handed alpha
Helix 83	AJ2	F	104	107	Right-handed 310
Helix 84	AJ3	F	120	140	Right-handed alpha
Helix 85	AJ4	F	154	158	Right-handed 310
Helix 86	AJ5	F	161	165	Right-handed 310
Helix 87	AJ6	F	178	185	Right-handed alpha
Helix 88	AJ7	F	199	216	Right-handed alpha
Helix 89	AJ8	F	221	227	Right-handed alpha
Helix 90	AJ9	F	245	250	Right-handed alpha
Helix 91	AK1	F	250	260	Right-handed alpha
Helix 92	AK2	F	272	277	Right-handed alpha
Helix 93	AK3	F	279	299	Right-handed alpha
Helix 94	AK4	F	309	314	Right-handed alpha
Helix 95	AK5	F	332	335	Right-handed 310
Helix 96	AK6	F	336	341	Right-handed alpha

There are 18 sheets in PDB entry 4Z10. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	40	42	first strand
Strand 2	A	326	330	parallel
Strand 3	A	316	320	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	148	149	first strand
Strand 2	A	52	56	parallel
Strand 3	A	342	344	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	102	103	first strand
Strand 2	A	108	112	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	40	42	first strand
Strand 2	B	326	330	parallel
Strand 3	B	316	320	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	148	149	first strand
Strand 2	B	52	56	parallel
Strand 3	B	342	344	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	102	103	first strand
Strand 2	B	108	112	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	40	42	first strand
Strand 2	C	326	330	parallel
Strand 3	C	316	320	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	148	149	first strand
Strand 2	C	52	56	parallel
Strand 3	C	342	344	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	102	103	first strand
Strand 2	C	108	112	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	40	42	first strand
Strand 2	D	326	330	parallel
Strand 3	D	316	320	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	148	149	first strand
Strand 2	D	52	56	parallel
Strand 3	D	342	344	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	102	103	first strand
Strand 2	D	108	112	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	40	42	first strand
Strand 2	E	326	330	parallel
Strand 3	E	316	320	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	148	149	first strand
Strand 2	E	52	56	parallel
Strand 3	E	342	344	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	102	103	first strand
Strand 2	E	108	112	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	40	42	first strand
Strand 2	F	326	330	parallel
Strand 3	F	316	320	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	148	149	first strand
Strand 2	F	52	56	parallel
Strand 3	F	342	344	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	102	103	first strand
Strand 2	F	108	112	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4Z10

Analysis of interatomic Contacts of Structural Units in PDB entry:
4Z10