Analysis of interatomic Contacts of Structural Units in PDB entry:
4Z16


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Z16 entry

There are 8 chains in PDB entry 4Z16 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PRO 814ASP 979
A
VAL 982ARG 1103
B
PRO 814ASP 979
B
VAL 982ARG 1103
C
PRO 814ASP 979
C
VAL 982ARG 1103
D
PRO 814ASP 979
D
VAL 982ARG 1103
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 4Z16. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
818 820Right-handed 310
Helix 2
AA2
A
861 878Right-handed alpha
Helix 3
AA3
A
909 918Right-handed alpha
Helix 4
AA4
A
922 943Right-handed alpha
Helix 5
AA5
A
951 953Right-handed 310
Helix 6
AA6
A
995 1002Right-handed alpha
Helix 7
AA7
A
1006 1022Right-handed alpha
Helix 8
AA8
A
1029 1038Right-handed alpha
Helix 9
AA9
A
1047 1057Right-handed alpha
Helix 10
AB1
A
1067 1078Right-handed alpha
Helix 11
AB2
A
1081 1085Right-handed 310
Helix 12
AB3
A
1087 1103Right-handed alpha
Helix 13
AB4
B
818 820Right-handed 310
Helix 14
AB5
B
861 878Right-handed alpha
Helix 15
AB6
B
909 918Right-handed alpha
Helix 16
AB7
B
922 943Right-handed alpha
Helix 17
AB8
B
951 953Right-handed 310
Helix 18
AB9
B
995 1002Right-handed alpha
Helix 19
AC1
B
1006 1021Right-handed alpha
Helix 20
AC2
B
1029 1038Right-handed alpha
Helix 21
AC3
B
1047 1057Right-handed alpha
Helix 22
AC4
B
1067 1078Right-handed alpha
Helix 23
AC5
B
1081 1085Right-handed 310
Helix 24
AC6
B
1087 1103Right-handed alpha
Helix 25
AC7
C
818 820Right-handed 310
Helix 26
AC8
C
861 878Right-handed alpha
Helix 27
AC9
C
909 918Right-handed alpha
Helix 28
AD1
C
922 943Right-handed alpha
Helix 29
AD2
C
951 953Right-handed 310
Helix 30
AD3
C
995 1001Right-handed alpha
Helix 31
AD4
C
1006 1021Right-handed alpha
Helix 32
AD5
C
1029 1038Right-handed alpha
Helix 33
AD6
C
1047 1057Right-handed alpha
Helix 34
AD7
C
1067 1078Right-handed alpha
Helix 35
AD8
C
1081 1085Right-handed 310
Helix 36
AD9
C
1087 1103Right-handed alpha
Helix 37
AE1
D
818 820Right-handed 310
Helix 38
AE2
D
861 878Right-handed alpha
Helix 39
AE3
D
909 918Right-handed alpha
Helix 40
AE4
D
922 943Right-handed alpha
Helix 41
AE5
D
951 953Right-handed 310
Helix 42
AE6
D
995 1001Right-handed alpha
Helix 43
AE7
D
1006 1021Right-handed alpha
Helix 44
AE8
D
1029 1038Right-handed alpha
Helix 45
AE9
D
1047 1057Right-handed alpha
Helix 46
AF1
D
1067 1078Right-handed alpha
Helix 47
AF2
D
1081 1085Right-handed 310
Helix 48
AF3
D
1087 1103Right-handed alpha
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There are 16 sheets in PDB entry 4Z16. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
822 830first strand
Strand 2
A
835 841anti-parallel
Strand 3
A
850 856anti-parallel
Strand 4
A
899 903anti-parallel
Strand 5
A
886 890anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
945 946first strand
Strand 2
A
972 973anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
955 959first strand
Strand 2
A
962 965anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
980 982first strand
Strand 2
A
1003 1005anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
822 830first strand
Strand 2
B
835 841anti-parallel
Strand 3
B
850 856anti-parallel
Strand 4
B
899 903anti-parallel
Strand 5
B
886 890anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
945 946first strand
Strand 2
B
972 973anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
955 959first strand
Strand 2
B
962 965anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
980 982first strand
Strand 2
B
1003 1005anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
822 830first strand
Strand 2
C
835 841anti-parallel
Strand 3
C
850 856anti-parallel
Strand 4
C
899 903anti-parallel
Strand 5
C
886 890anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
945 946first strand
Strand 2
C
972 973anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
955 959first strand
Strand 2
C
962 965anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
980 982first strand
Strand 2
C
1003 1005anti-parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
822 830first strand
Strand 2
D
835 841anti-parallel
Strand 3
D
850 856anti-parallel
Strand 4
D
899 903anti-parallel
Strand 5
D
886 890anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
945 946first strand
Strand 2
D
972 973anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
955 959first strand
Strand 2
D
962 965anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
980 982first strand
Strand 2
D
1003 1005anti-parallel
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