Analysis of interatomic Contacts of Structural Units in PDB entry:
4Z38


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Z38 entry

There are 2 chains in PDB entry 4Z38 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 327PHE 767
B
 PRO 324ALA 512
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 4Z38. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
330 338Right-handed alpha
Helix 2
AA2
A
354 364Right-handed alpha
Helix 3
AA3
A
376 391Right-handed alpha
Helix 4
AA4
A
408 421Right-handed alpha
Helix 5
AA5
A
435 444Right-handed alpha
Helix 6
AA6
A
466 475Right-handed alpha
Helix 7
AA7
A
478 488Right-handed alpha
Helix 8
AA8
A
492 501Right-handed alpha
Helix 9
AA9
A
523 543Right-handed alpha
Helix 10
AB1
A
558 568Right-handed alpha
Helix 11
AB2
A
588 597Right-handed alpha
Helix 12
AB3
A
626 641Right-handed alpha
Helix 13
AB4
A
648 658Right-handed alpha
Helix 14
AB5
A
663 671Right-handed alpha
Helix 15
AB6
A
675 685Right-handed alpha
Helix 16
AB7
A
685 707Right-handed alpha
Helix 17
AB8
A
712 716Right-handed 310
Helix 18
AB9
A
721 732Right-handed alpha
Helix 19
AC1
A
734 742Right-handed 310
Helix 20
AC2
A
743 767Right-handed alpha
Helix 21
AC3
B
330 338Right-handed alpha
Helix 22
AC4
B
354 364Right-handed alpha
Helix 23
AC5
B
376 391Right-handed alpha
Helix 24
AC6
B
407 421Right-handed alpha
Helix 25
AC7
B
435 444Right-handed alpha
Helix 26
AC8
B
466 475Right-handed alpha
Helix 27
AC9
B
478 488Right-handed alpha
Helix 28
AD1
B
492 501Right-handed alpha
Helix 29
AD2
B
523 543Right-handed alpha
Helix 30
AD3
B
558 569Right-handed alpha
Helix 31
AD4
B
588 597Right-handed alpha
Helix 32
AD5
B
626 641Right-handed alpha
Helix 33
AD6
B
648 658Right-handed alpha
Helix 34
AD7
B
663 674Right-handed alpha
Helix 35
AD8
B
676 685Right-handed alpha
Helix 36
AD9
B
685 707Right-handed alpha
Helix 37
AE1
B
712 716Right-handed 310
Helix 38
AE2
B
721 732Right-handed alpha
Helix 39
AE3
B
734 742Right-handed 310
Helix 40
AE4
B
743 765Right-handed alpha
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There are 6 sheets in PDB entry 4Z38. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
343 345first strand
Strand 2
A
367 370parallel
Strand 3
A
398 402parallel
Strand 4
A
425 429parallel
Strand 5
A
459 464parallel
Strand 6
A
507 511parallel
Strand 7
A
550 553parallel
Strand 8
A
572 575parallel
Strand 9
A
343 345parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
447 448first strand
Strand 2
A
454 455anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
603 607first strand
Strand 2
A
617 621anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
343 345first strand
Strand 2
B
367 370parallel
Strand 3
B
398 402parallel
Strand 4
B
425 429parallel
Strand 5
B
459 464parallel
Strand 6
B
507 511parallel
Strand 7
B
550 553parallel
Strand 8
B
572 575parallel
Strand 9
B
343 345parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
447 448first strand
Strand 2
B
454 455anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
603 607first strand
Strand 2
B
617 621anti-parallel
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