Analysis of interatomic Contacts of Structural Units in PDB entry:
4Z48


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Z48 entry

There are 2 chains in PDB entry 4Z48 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 29GLN 268
B
 THR 29GLN 268
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 4Z48. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 44Right-handed alpha
Helix 2
AA2
A
129 135Right-handed 310
Helix 3
AA3
A
143 148Right-handed 310
Helix 4
AA4
A
152 154Right-handed 310
Helix 5
AA5
A
258 267Right-handed 310
Helix 6
AA6
B
30 44Right-handed alpha
Helix 7
AA7
B
129 135Right-handed 310
Helix 8
AA8
B
143 148Right-handed 310
Helix 9
AA9
B
152 154Right-handed 310
Helix 10
AB1
B
258 267Right-handed 310
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There are 2 sheets in PDB entry 4Z48. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 127first strand
Strand 2
A
114 119anti-parallel
Strand 3
A
100 105anti-parallel
Strand 4
A
83 92anti-parallel
Strand 5
A
64 77anti-parallel
Strand 6
A
50 61anti-parallel
Strand 7
A
242 253anti-parallel
Strand 8
A
227 237anti-parallel
Strand 9
A
212 224anti-parallel
Strand 10
A
200 207anti-parallel
Strand 11
A
186 194anti-parallel
Strand 12
A
169 178anti-parallel
Strand 13
A
156 166anti-parallel
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There are 13 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 127first strand
Strand 2
B
114 119anti-parallel
Strand 3
B
100 105anti-parallel
Strand 4
B
83 92anti-parallel
Strand 5
B
64 77anti-parallel
Strand 6
B
50 61anti-parallel
Strand 7
B
242 253anti-parallel
Strand 8
B
227 237anti-parallel
Strand 9
B
212 224anti-parallel
Strand 10
B
200 207anti-parallel
Strand 11
B
186 194anti-parallel
Strand 12
B
169 178anti-parallel
Strand 13
B
156 166anti-parallel
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