Analysis of interatomic Contacts of Structural Units in PDB entry:
4Z6Z

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4Z6Z entry

There are 4 chains in PDB entry 4Z6Z (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 4	GLY 358
B	GLU 4	GLY 362
C	GLU 4	LYS 357
D	GLU 4	TYR 142

There are 30 helices in PDB entry 4Z6Z. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	27	36	Right-handed alpha
Helix 2	AA2	A	83	97	Right-handed alpha
Helix 3	AA3	A	162	173	Right-handed alpha
Helix 4	AA4	A	221	235	Right-handed alpha
Helix 5	AA5	A	237	239	Right-handed 310
Helix 6	AA6	A	301	307	Right-handed alpha
Helix 7	AA7	A	328	334	Right-handed alpha
Helix 8	AA8	B	27	36	Right-handed alpha
Helix 9	AA9	B	83	97	Right-handed alpha
Helix 10	AB1	B	162	173	Right-handed alpha
Helix 11	AB2	B	221	235	Right-handed alpha
Helix 12	AB3	B	237	239	Right-handed 310
Helix 13	AB4	B	301	307	Right-handed alpha
Helix 14	AB5	B	328	334	Right-handed alpha
Helix 15	AB6	B	355	357	Right-handed 310
Helix 16	AB7	C	27	36	Right-handed alpha
Helix 17	AB8	C	84	97	Right-handed alpha
Helix 18	AB9	C	162	173	Right-handed alpha
Helix 19	AC1	C	221	235	Right-handed alpha
Helix 20	AC2	C	237	239	Right-handed 310
Helix 21	AC3	C	301	307	Right-handed alpha
Helix 22	AC4	C	328	334	Right-handed alpha
Helix 23	AC5	D	27	36	Right-handed alpha
Helix 24	AC6	D	83	97	Right-handed alpha
Helix 25	AC7	D	162	173	Right-handed alpha
Helix 26	AC8	D	221	235	Right-handed alpha
Helix 27	AC9	D	237	239	Right-handed 310
Helix 28	AD1	D	301	307	Right-handed alpha
Helix 29	AD2	D	328	335	Right-handed alpha
Helix 30	AD3	D	355	357	Right-handed 310

There are 16 sheets in PDB entry 4Z6Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	46	first strand
Strand 2	A	50	54	anti-parallel
Strand 3	A	64	68	anti-parallel
Strand 4	A	15	25	parallel
Strand 5	A	73	81	anti-parallel
Strand 6	A	125	129	parallel
Strand 7	A	115	119	anti-parallel
Strand 8	A	101	104	anti-parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	241	247	first strand
Strand 2	A	254	259	anti-parallel
Strand 3	A	265	270	anti-parallel
Strand 4	A	211	218	parallel
Strand 5	A	152	160	anti-parallel
Strand 6	A	202	206	parallel
Strand 7	A	188	194	anti-parallel
Strand 8	A	176	182	anti-parallel
Strand 9	A	283	286	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	340	first strand
Strand 2	A	351	352	anti-parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	42	46	first strand
Strand 2	B	50	54	anti-parallel
Strand 3	B	64	68	anti-parallel
Strand 4	B	15	25	parallel
Strand 5	B	73	81	anti-parallel
Strand 6	B	125	129	parallel
Strand 7	B	115	119	anti-parallel
Strand 8	B	101	104	anti-parallel

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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	241	247	first strand
Strand 2	B	254	259	anti-parallel
Strand 3	B	265	270	anti-parallel
Strand 4	B	211	218	parallel
Strand 5	B	152	160	anti-parallel
Strand 6	B	202	206	parallel
Strand 7	B	188	194	anti-parallel
Strand 8	B	176	182	anti-parallel
Strand 9	B	283	286	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	241	247	first strand
Strand 2	B	254	259	anti-parallel
Strand 3	B	265	270	anti-parallel
Strand 4	B	211	218	parallel
Strand 5	B	309	310	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	340	first strand
Strand 2	B	351	352	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	359	361	first strand
Strand 2	D	359	361	anti-parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	42	46	first strand
Strand 2	C	50	54	anti-parallel
Strand 3	C	64	68	anti-parallel
Strand 4	C	15	25	parallel
Strand 5	C	73	81	anti-parallel
Strand 6	C	125	129	parallel
Strand 7	C	115	119	anti-parallel
Strand 8	C	101	104	anti-parallel

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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	241	247	first strand
Strand 2	C	254	259	anti-parallel
Strand 3	C	265	270	anti-parallel
Strand 4	C	211	218	parallel
Strand 5	C	152	160	anti-parallel
Strand 6	C	202	206	parallel
Strand 7	C	188	194	anti-parallel
Strand 8	C	176	182	anti-parallel
Strand 9	C	283	286	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	241	247	first strand
Strand 2	C	254	259	anti-parallel
Strand 3	C	265	270	anti-parallel
Strand 4	C	211	218	parallel
Strand 5	C	309	310	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	339	340	first strand
Strand 2	C	351	352	anti-parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	42	46	first strand
Strand 2	D	50	54	anti-parallel
Strand 3	D	64	68	anti-parallel
Strand 4	D	15	25	parallel
Strand 5	D	73	81	anti-parallel
Strand 6	D	125	129	parallel
Strand 7	D	115	119	anti-parallel
Strand 8	D	101	104	anti-parallel

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There are 9 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	241	247	first strand
Strand 2	D	254	259	anti-parallel
Strand 3	D	265	270	anti-parallel
Strand 4	D	211	218	parallel
Strand 5	D	152	160	anti-parallel
Strand 6	D	202	206	parallel
Strand 7	D	188	194	anti-parallel
Strand 8	D	176	182	anti-parallel
Strand 9	D	283	286	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	241	247	first strand
Strand 2	D	254	259	anti-parallel
Strand 3	D	265	270	anti-parallel
Strand 4	D	211	218	parallel
Strand 5	D	309	310	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	339	340	first strand
Strand 2	D	351	352	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4Z6Z

Analysis of interatomic Contacts of Structural Units in PDB entry:
4Z6Z