Analysis of interatomic Contacts of Structural Units in PDB entry:
4Z7C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Z7C entry

There is 1 chain in PDB entry 4Z7C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 2GLU 325
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 4Z7C. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
24 28Right-handed 310
Helix 2
AA2
A
40 43Right-handed 310
Helix 3
AA3
A
68 85Right-handed alpha
Helix 4
AA4
A
98 102Right-handed 310
Helix 5
AA5
A
107 122Right-handed alpha
Helix 6
AA6
A
127 139Right-handed alpha
Helix 7
AA7
A
140 147Right-handed 310
Helix 8
AA8
A
193 205Right-handed alpha
Helix 9
AA9
A
207 228Right-handed alpha
Helix 10
AB1
A
230 252Right-handed alpha
Helix 11
AB2
A
260 274Right-handed alpha
Helix 12
AB3
A
294 303Right-handed alpha
Helix 13
AB4
A
304 306Right-handed 310
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There are 4 sheets in PDB entry 4Z7C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
56 59first strand
Strand 2
A
89 96parallel
Strand 3
A
45 52anti-parallel
Strand 4
A
4 9anti-parallel
Strand 5
A
320 324anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
12 16first strand
Strand 2
A
34 38anti-parallel
Strand 3
A
150 154anti-parallel
Strand 4
A
165 170anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
21 22first strand
Strand 2
A
29 30anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
277 279first strand
Strand 2
A
287 291anti-parallel
Strand 3
A
178 183anti-parallel
Strand 4
A
310 314anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il