Analysis of interatomic Contacts of Structural Units in PDB entry:
4Z7F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Z7F entry

There are 6 chains in PDB entry 4Z7F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 7LEU 174
B
 PHE 6GLU 176
C
 GLY 7LEU 174
D
 PHE 6GLU 176
E
 SER 10PRO 173
F
 GLY 7GLY 171
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 4Z7F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 28Right-handed alpha
Helix 2
AA2
A
40 71Right-handed alpha
Helix 3
AA3
A
78 96Right-handed alpha
Helix 4
AA4
A
101 118Right-handed alpha
Helix 5
AA5
A
120 129Right-handed alpha
Helix 6
AA6
A
138 162Right-handed alpha
Helix 7
AA7
B
9 27Right-handed alpha
Helix 8
AA8
B
40 70Right-handed alpha
Helix 9
AA9
B
77 96Right-handed alpha
Helix 10
AB1
B
101 118Right-handed alpha
Helix 11
AB2
B
120 129Right-handed alpha
Helix 12
AB3
B
139 161Right-handed alpha
Helix 13
AB4
C
9 27Right-handed alpha
Helix 14
AB5
C
40 51Right-handed alpha
Helix 15
AB6
C
53 70Right-handed alpha
Helix 16
AB7
C
77 96Right-handed alpha
Helix 17
AB8
C
101 129Right-handed alpha
Helix 18
AB9
C
138 162Right-handed alpha
Helix 19
AC1
D
8 29Right-handed alpha
Helix 20
AC2
D
40 52Right-handed alpha
Helix 21
AC3
D
52 71Right-handed alpha
Helix 22
AC4
D
77 96Right-handed alpha
Helix 23
AC5
D
101 116Right-handed alpha
Helix 24
AC6
D
120 130Right-handed alpha
Helix 25
AC7
D
138 160Right-handed alpha
Helix 26
AC8
E
11 25Right-handed alpha
Helix 27
AC9
E
42 52Right-handed alpha
Helix 28
AD1
E
52 71Right-handed alpha
Helix 29
AD2
E
81 94Right-handed alpha
Helix 30
AD3
E
103 118Right-handed alpha
Helix 31
AD4
E
148 162Right-handed alpha
Helix 32
AD5
F
9 28Right-handed alpha
Helix 33
AD6
F
40 52Right-handed alpha
Helix 34
AD7
F
53 71Right-handed alpha
Helix 35
AD8
F
78 95Right-handed alpha
Helix 36
AD9
F
106 129Right-handed alpha
Helix 37
AE1
F
140 162Right-handed alpha
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There are 3 sheets in PDB entry 4Z7F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 32first strand
Strand 2
A
35 37anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 32first strand
Strand 2
B
35 36anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
30 32first strand
Strand 2
D
35 37anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il