Analysis of interatomic Contacts of Structural Units in PDB entry:
4Z7X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Z7X entry

There are 2 chains in PDB entry 4Z7X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PHE 86SER 296
B
SER 83ALA 300
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 4Z7X. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
88 92Right-handed 310
Helix 2
AA2
A
123 128Right-handed 310
Helix 3
AA3
A
139 159Right-handed alpha
Helix 4
AA4
A
174 191Right-handed alpha
Helix 5
AA5
A
194 213Right-handed alpha
Helix 6
AA6
A
219 230Right-handed alpha
Helix 7
AA7
A
233 238Right-handed alpha
Helix 8
AA8
A
239 247Right-handed alpha
Helix 9
AA9
A
249 263Right-handed alpha
Helix 10
AB1
A
279 283Right-handed 310
Helix 11
AB2
A
287 295Right-handed alpha
Helix 12
AB3
B
88 92Right-handed 310
Helix 13
AB4
B
139 159Right-handed alpha
Helix 14
AB5
B
174 191Right-handed alpha
Helix 15
AB6
B
194 213Right-handed alpha
Helix 16
AB7
B
219 230Right-handed alpha
Helix 17
AB8
B
233 238Right-handed alpha
Helix 18
AB9
B
239 247Right-handed alpha
Helix 19
AC1
B
249 263Right-handed alpha
Helix 20
AC2
B
279 283Right-handed 310
Helix 21
AC3
B
287 295Right-handed alpha
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There are 2 sheets in PDB entry 4Z7X. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
113 115first strand
Strand 2
A
163 168anti-parallel
Strand 3
A
130 135parallel
Strand 4
A
270 273anti-parallel
Strand 5
A
276 277anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
113 115first strand
Strand 2
B
163 168anti-parallel
Strand 3
B
130 135parallel
Strand 4
B
270 273anti-parallel
Strand 5
B
276 277anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il