Analysis of interatomic Contacts of Structural Units in PDB entry:
4Z8N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Z8N entry

There are 2 chains in PDB entry 4Z8N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 158LYS 455
B
 ASP 160THR 450
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 4Z8N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
160 164Right-handed 310
Helix 2
AA2
A
182 195Right-handed alpha
Helix 3
AA3
A
198 227Right-handed alpha
Helix 4
AA4
A
227 243Right-handed alpha
Helix 5
AA5
A
243 248Right-handed alpha
Helix 6
AA6
A
250 273Right-handed alpha
Helix 7
AA7
A
275 294Right-handed alpha
Helix 8
AA8
A
295 297Right-handed 310
Helix 9
AA9
A
305 320Right-handed alpha
Helix 10
AB1
A
324 352Right-handed alpha
Helix 11
AB2
A
355 395Right-handed alpha
Helix 12
AB3
A
402 455Right-handed alpha
Helix 13
AB4
B
160 164Right-handed 310
Helix 14
AB5
B
182 195Right-handed alpha
Helix 15
AB6
B
198 227Right-handed alpha
Helix 16
AB7
B
227 243Right-handed alpha
Helix 17
AB8
B
243 248Right-handed alpha
Helix 18
AB9
B
250 273Right-handed alpha
Helix 19
AC1
B
275 294Right-handed alpha
Helix 20
AC2
B
295 297Right-handed 310
Helix 21
AC3
B
305 320Right-handed alpha
Helix 22
AC4
B
323 352Right-handed alpha
Helix 23
AC5
B
355 391Right-handed alpha
Helix 24
AC6
B
402 450Right-handed alpha
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There are 3 sheets in PDB entry 4Z8N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 168first strand
Strand 2
A
174 176anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
166 168first strand
Strand 2
B
174 176anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
303 304first strand
Strand 2
B
400 401anti-parallel
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